Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01202 ATGGTGGTTAGGATTCGTCTATCACGTTTAGGATGCAAGAACAAACCATTCTACCGTGTTATGGCCGCCGATAGCAGATCTCCAAGAGACGGAAAACACCTCGAAGTTCTGGGTTATTACAATCCTTTACCTGGTCAAGATGGTGGCAAACGAATGGGAATCAATTTCGATAGAGTCaaGTATTGGCTTTCTGTTGGAGCTCAACCATCCAATCCAGTAGAGCGTCTTCTATTTCGAGCAGGGTTACTTCCACCTCCACCAACTGTGGCTATGGCACGCAAAGGTGGACCTCGTGACATGCGTCCTGTCGATGCTTTAACCGGACGTGTCATCGATCAACAGAAGCAGCCTCCTAATAATTCCAACAATGGCACTGCTAACAACTGGGATAAAGTGCTTTCAGAGTTCAAGAACATGTCCCTTGATCGGAAACTAATGCAGATAACACAACTGAAAACCCTTACCAATCCTCCATCCTATGGATTCCCCACGGTTTGCTTTGGGGCACAGTTGATGAAGGGATTAGCAGCAGTGTCCTTAACCATGCCATTTCATTCAGAGGAACGTGCAACTAAGACTCGTCGTTGGAATGCACCAATGGTGAGGCAATTTTGA 615 0.4634 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGTANNWDKVLSEFKNMSLDRKLMQITQLKTLTNPPSYGFPTVCFGAQLMKGLAAVSLTMPFHSEERATKTRRWNAPMVRQF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01202 204 Gene3D - 1 125 IPR023803 -
Car01g01202 204 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 113 - -
Car01g01202 204 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Car01g01202 204 PANTHER 30S RIBOSOMAL PROTEIN S16 1 113 IPR000307 GO:0003735|GO:0005840|GO:0006412
Car01g01202 204 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Car01g01202 204 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Car01g01202 204 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01202 Car-Chr1 14709061 14711075 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01202 K02959 - gmx:100305630 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01202 01 14709061 14711075 Car01g01202 01 14709061 14711075 ECH