Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01201 ATGGCCAACAACAACAACCAAGTTTTCAACATGGCAGATCTCACTTCTGCAGCTCTCAATGAAGAGGATCGAGCTGACCTAGTTAACGCTCTCAAGAGCAAGATTCAAAGCTTGGCTGGGCAGCATTCTGATGTTCTGGAGACTCTATCCCCTGTTGTCAGAAAGCGTGTTGAGGTTCTGAGAGAGATTCAGGGTGAACATGATGAATTGGAGGCAAAATTTCTGGAGGAGAGAGCGGNNNNNNNNNNNNNTCTGGAGGAGAAAGCGGTTCTTGAAGCCAAATACCAGAAACTGTATCAACCATTGTACACTAAGCGCTATGAAATTGTGAATGGTGTTGCTGAAGTGGATGTGGCAATTGAAACCAAAGCTGATGCAGCAGAGGATCAAGAGAAAGGTGTGCCTTCTTTCTGGCTCACCGCAATGAAAAACAACGACGTGCTGGTTGAAGAGATTTCGGAGGGTGATGAAGGTGCTCTCAAGTTTCTCAAGGATATCAAGTGGAGCAGGATTGAGGAGCCAAAAGGATTCAAGCTTGAGTTCTTCTTTGATACCAATCCATACTTTTCAAACTCTGTCTTGACAAAAATTTATCATATGGTTGACGAGGATGAACCGATTTTGGAGAAGGCTATCGGGACTGAAATTGAATGGCTTCCGGGCAAGTGCTTAACACAGAAAATTTTGAAGAAAAAGCCCAAGAAGGGTTCCAAGAATGCTAAGCCAATTATCAAAACTGAAACCTGTGAAAGTTTCTTCAACTTTTTCAATCCACCAGAAGTCCCCGAAGATGACGAAGACATTGATGAAGATGCTGCTGAGGAGCTTCAGAATAAGATGGAGCAGGACTATGACATTGGGTCAACAATAAGAGACAAGATCATCCCACATGCTGTGTCATGGTTTACTGGGGAGGCTGCTGAGGGAGAGGATTTTGAAGATCTGgatgatgatgaggatgatgaggatgatgatgatgaggatgaggatgatgaagacgaggaggacgaggatgatgacgatgatgatgaGgaagacgaggaagagactaagacaaagaagaagTCATCAGCTAGCAAGAGCGGTGCACAGCTCAGCGATGCTCAGGGCGAAAGACCACCAGAGTGCAAGCAGCAGTAA 1140 0.3982 MANNNNQVFNMADLTSAALNEEDRADLVNALKSKIQSLAGQHSDVLETLSPVVRKRVEVLREIQGEHDELEAKFLEERAXXXXXLEEKAVLEAKYQKLYQPLYTKRYEIVNGVAEVDVAIETKADAAEDQEKGVPSFWLTAMKNNDVLVEEISEGDEGALKFLKDIKWSRIEEPKGFKLEFFFDTNPYFSNSVLTKIYHMVDEDEPILEKAIGTEIEWLPGKCLTQKILKKKPKKGSKNAKPIIKTETCESFFNFFNPPEVPEDDEDIDEDAAEELQNKMEQDYDIGSTIRDKIIPHAVSWFTGEAAEGEDFEDLDDDEDDEDDDDEDEDDEDEEDEDDDDDDEEDEEETKTKKKSSASKSGAQLSDAQGERPPECKQQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01201 379 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 4 379 - -
Car01g01201 379 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 4 379 IPR002164 GO:0005634|GO:0006334
Car01g01201 379 Gene3D Nucleosome assembly protein 129 305 - -
Car01g01201 379 SUPERFAMILY NAP-like 32 304 IPR037231 -
Car01g01201 379 Coils Coil 85 87 - -
Car01g01201 379 MobiDBLite consensus disorder prediction 301 379 - -
Car01g01201 379 Pfam Nucleosome assembly protein (NAP) 55 305 IPR002164 GO:0005634|GO:0006334
Car01g01201 379 Gene3D - 47 116 - -
Car01g01201 379 Coils Coil 60 79 - -
Car01g01201 379 MobiDBLite consensus disorder prediction 307 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01201 Car-Chr1 14596891 14601014 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01201 K11279 - gmx:100785314 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01201 01 14596891 14601014 Car01g01201 01 14596891 14601014 ECH