Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01194 ATGCGTCTAATTTACGATAACTTTTCTATATTTTCAGCAGACCAAGAATATTTAATCTCATTCAATAACAAAAATGATACCAATGAAGCAGATTATGTTGAAGGCATTCTTCTATTTAACAAGCCGCTATTAGATCTTTCCTTTTATCCACCTCCTGATAAAACAAGGATAAAATCCTTGGTAACTAAATGTGGCATTACCTATGTTATAGAGCTTGTCAAATATTATGACACAAATACTCAACAACATGTCGACGAGGCGAAGTGGTTGCGTCTAATTTACAGTGATTTTTCCACATTTTCAACAGACCAAGAACATTTAATCTCATTCAATGCAGCAAATTATGTAGAAGGCATAATTCTATTGAACAAGCCACTATTAGATCTTTCCTTTTATCTATCTCCTGATCACCCAAGGATTAAATCCTTACTAACTAAATATGGCATTGTCTATGTTATTGAGCTTGTGAAATATTATGACACAAGTTCTCAACAACGTATCAATGAGGAAGTTGACAATTTGGTCAAAGGATTGAAGTTTGTTCCAACGTTCATGTTTCAAAAGGATTTGACATACAAGGAATTTATAAAGAGTCCATGGAGAGGAGTTAGCTCTTAG 618 0.335 MRLIYDNFSIFSADQEYLISFNNKNDTNEADYVEGILLFNKPLLDLSFYPPPDKTRIKSLVTKCGITYVIELVKYYDTNTQQHVDEAKWLRLIYSDFSTFSTDQEHLISFNAANYVEGIILLNKPLLDLSFYLSPDHPRIKSLLTKYGIVYVIELVKYYDTSSQQRINEEVDNLVKGLKFVPTFMFQKDLTYKEFIKSPWRGVSS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01194 205 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 86 197 IPR015345 GO:0009690|GO:0019139|GO:0050660
Car01g01194 205 PANTHER GULONOLACTONE OXIDASE 1 86 - -
Car01g01194 205 Gene3D - 88 201 IPR016170 -
Car01g01194 205 SUPERFAMILY FAD-linked oxidases, C-terminal domain 85 197 IPR016164 GO:0003824|GO:0050660
Car01g01194 205 SUPERFAMILY FAD-linked oxidases, C-terminal domain 1 82 IPR016164 GO:0003824|GO:0050660
Car01g01194 205 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 88 197 - -
Car01g01194 205 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 1 86 - -
Car01g01194 205 Gene3D - 1 87 IPR016170 -
Car01g01194 205 PANTHER GULONOLACTONE OXIDASE 88 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01194 Car-Chr1 14419240 14421204 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01194 K00279 - gmx:100808553 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01194 01 14419240 14421204 Car01g01194 01 14419240 14421204 ECH
Car07g00324 07 2934106 2940362 Car01g01194 01 14419240 14421204 PCT