Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01184 ATGGAGAGTTTAACAAGGTGGAGAAAGTTTTATATGGTTATAGGATTGGTGTTGTTTTTGTGTTTGTTTGTTTTTTCTGTCACAGCTTCTGTGACTTATGATCATAAAGCTATTGTAATTAATGGACAGAGAAGAATTTTGATCTCTGGCTCTATTCATTATCCAAGAAGCACACCTCAGATGTGGCCAGATTTAATTCAAAAGGCCAAAGATGGAGGTGTTGATGTTATTCAGACATATGTGTTTTGGAATGGACATGAGCCTTCTCCTGGAAATTATTACTTTGAAGATAGGTTTGACTTGGTTAAGTTTGTCAAGGTGGTTCAACAAGCTGGCCTTTATGTTAACTTGCGTATTGGTCCCTACGTTTGCGCTGAATGGAACTTTGGGGGATTTCCTGTTTGGCTAAAGTATGTACCAGGTGTTGCTTTCAGAACAGACAACGAGCCGTTCAAGGCAGCAATGCAAAAATTCACTGCTAAGATTGTCAGCATGATGAAAGCAGAGAATTTATTTGAAAGCCAAGGTGGTCCAATAATTATGTCTCAGATTGAGAATGAGTATGGACCTGTGGAATGGGAAATTGGTGCTCCTGGAAAAGCTTACACCAAATGGTTTTCTCAAATGGCCATTGGTCTAGATACCGGCGTACCGTGGATTATGTGTAAGCAAGAAGACGCTCCTGATCCTATTATTGATACCTGCAATGGATATTACTGTGAAAACTTCACTCCCAACAAGAACTACAAACCCAAAATGTGGACTGAAAATTGGTCTGGCTGGTACACTGATTTTGGGAGCGCCGTCCCTTATAGACCGGCACAAGACGTGGCATTCTCAGTTGCAAGATTCATACAAAATCGCGGCTCATATGTTAACTACTATATGTACCATGGTGGAACTAATTTTGGAAGGACATCTGCTGGCCTTTTCATTGCCACAAGCTATGACTACGATGCACCTATTGATGAATACGGACTTCTAAGTGAACCAAAATGGGGGCATCTAAGAAATTTACATAAAGCAATAAAGCAATGTGAGCCGATTTTAGTGTCTGTGGATCCGACGGTGTCATGGCCAGGAAAAAACCTTGAGGTACATGTTTACAAGACGAGCACTGGTGCCTGCGCTGCATTCCTTGCAAATTATGACACCACATCTCCGGCAAAAGTTACATTTGGAAATGGCCAATACGACCTACCGCCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGCTGTTTTCAACACTGCAAAGGTTGGTACAGTACCAAGCTTCCATAGAAAGATGACTCCTGTGAGTAGCGCATTCGATTGGCAGTCATACAACGAAGCACCCGCCTCGTCCGGTATAGATGATTCCACCACAGCAAATGCACTTTTGGAGCAGATCAAGGTGACTCGCGATTCTTCAGATTATTTGTGGTATATGACAGATGTCAACATTAGTCCTAATGAAGGTTTTATAAAGAATGGTCAGTATCCTGTTCTTACTGCAATGTCAGCTGGCCATGTTCTGCATGTTTTTGTTAATGGTCAATTTTCGGGAACTGCTTATGGAGGATTGGAGAATCCTAAATTAACATTTAGTAATAGTGTAAAGCTGAGGGTTGGAAATAACAAGATTTCTTTACTTAGTGTTGCCGTCGGTCTCTCGAATGTTGGCTTGCACTATGAAACATGGAATGTTGGTGTCTTAGGCCCGGTAACGTTGAAGGGTCTAAACGAGGGGACAAGAGACTTGTCTGGACAGAAATGGTCTTACAAGATTGGACTGAAAGGGGAAACCTTGAACCTTCATACCTTAATTGGAAGTTCCTCTGTTCAATGGACAAAAGGATCATCGTTGGTGAAAAAACAACCTTTGACTTGGTACAAGGCAACTTTCGACGCCCCCGCTGGCAACGATCCATTGGCGCTAGATATGAGTAGCATGGGAAAAGGTGAAATATGGGTAAATGGTGAAAGCATTGGTCGGCATTGGCCGGCATATATAGCACGTGGAAGTTGTGGTGGTTGTAATTATGCCGGAACGTTTACCGATAAAAAATGCCGAACAAGCTGTGGACAACCCACCCAAAAATGGTATCATATTCCTCGCTCCTGGGTGAACCCAAGAGGGAACTTCTTAGTTGTGCTTGAAGAATGGGGAGGCGATCCTTCTGGAATTTCATTGGTGAAAAGAACATGA 2193 0.4241 MESLTRWRKFYMVIGLVLFLCLFVFSVTASVTYDHKAIVINGQRRILISGSIHYPRSTPQMWPDLIQKAKDGGVDVIQTYVFWNGHEPSPGNYYFEDRFDLVKFVKVVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYVPGVAFRTDNEPFKAAMQKFTAKIVSMMKAENLFESQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWFSQMAIGLDTGVPWIMCKQEDAPDPIIDTCNGYYCENFTPNKNYKPKMWTENWSGWYTDFGSAVPYRPAQDVAFSVARFIQNRGSYVNYYMYHGGTNFGRTSAGLFIATSYDYDAPIDEYGLLSEPKWGHLRNLHKAIKQCEPILVSVDPTVSWPGKNLEVHVYKTSTGACAAFLANYDTTSPAKVTFGNGQYDLPPWSISILPDCKTAVFNTAKVGTVPSFHRKMTPVSSAFDWQSYNEAPASSGIDDSTTANALLEQIKVTRDSSDYLWYMTDVNISPNEGFIKNGQYPVLTAMSAGHVLHVFVNGQFSGTAYGGLENPKLTFSNSVKLRVGNNKISLLSVAVGLSNVGLHYETWNVGVLGPVTLKGLNEGTRDLSGQKWSYKIGLKGETLNLHTLIGSSSVQWTKGSSLVKKQPLTWYKATFDAPAGNDPLALDMSSMGKGEIWVNGESIGRHWPAYIARGSCGGCNYAGTFTDKKCRTSCGQPTQKWYHIPRSWVNPRGNFLVVLEEWGGDPSGISLVKRT 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01184 730 SUPERFAMILY Galactose-binding domain-like 586 726 IPR008979 -
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 Gene3D - 451 583 - -
Car01g01184 730 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Car01g01184 730 Pfam Beta-sandwich domain in beta galactosidase 350 421 IPR041392 -
Car01g01184 730 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Car01g01184 730 Pfam Glycosyl hydrolases family 35 38 342 IPR031330 -
Car01g01184 730 PANTHER BETA-GALACTOSIDASE RELATED 13 730 IPR001944 GO:0004553|GO:0005975
Car01g01184 730 Gene3D Glycosidases 25 347 - -
Car01g01184 730 Gene3D - 593 730 - -
Car01g01184 730 SUPERFAMILY Galactose-binding domain-like 405 576 IPR008979 -
Car01g01184 730 PANTHER BETA-GALACTOSIDASE 13 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01184 Car-Chr1 14132384 14138809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01184 9 730 Glycoside Hydrolase AT3G52840 68.837 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01184 - - gmx:100810170 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01184 01 14132384 14138809 Car01g01184 01 14132384 14138809 ECH