Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01179 ATGGCTACATATGCGAGAATCAACGTAACACTGATGATGGCGATGATGATAGCTTTAGCAATTTCACTTTATTCAGCTTCAGCTTCACCTGAGGGGGAGTTTGTTCACAAAACCATTTCTTCACACAAAATTGTTATTTTTTCAAAGACCTATTGTCCGTACTGTAAAAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAAGTGCCATTTGTTGTGGAGCTTGATGAGAGAGATGATGGTTCGAAAATTCAGGATATTTTGACTAATATTATTGGGAAGCGCACTGTGCCACAAGTTTTCATCAATGGAAAACACCTTGGAGGATCAGATGATACTGTCGAAGCTTATGAGAGTGGACTGCTTGCTAAACTTCTAGGAATTGAGAAGAAGGATTATGATGATCTCTGA 408 0.3873 MATYARINVTLMMAMMIALAISLYSASASPEGEFVHKTISSHKIVIFSKTYCPYCKRAKAVFKELNQVPFVVELDERDDGSKIQDILTNIIGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIEKKDYDDL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01179 135 Gene3D Glutaredoxin 24 126 - -
Car01g01179 135 SUPERFAMILY Thioredoxin-like 33 125 IPR036249 -
Car01g01179 135 CDD GRX_GRXh_1_2_like 43 124 - -
Car01g01179 135 TIGRFAM GRX_euk: glutaredoxin 44 124 IPR011899 -
Car01g01179 135 Pfam Glutaredoxin 44 105 IPR002109 -
Car01g01179 135 PANTHER GLUTAREDOXIN 2 11 122 - -
Car01g01179 135 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Car01g01179 135 PRINTS Glutaredoxin signature 44 62 IPR014025 -
Car01g01179 135 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Car01g01179 135 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Car01g01179 135 ProSiteProfiles Glutaredoxin domain profile. 32 132 - -
Car01g01179 135 PANTHER BNAA02G04900D PROTEIN 11 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01179 Car-Chr1 14001406 14004382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01179 33 125 Miscellaneous Gene Families AT4G15700 34.409 9.11e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01179 K03676 - gmx:100777703 196.438