Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01176 ATGGCCAAATCAATAGTAGACTTCACAGTACAAAAAATCAGTGATTTACTCATTGAAGAAGCTGTGTTCTTATATGGAGTGAGAGACAAAGTGAAGCAGCTGAGAACTGAGTTAAGGAGGATGGAATCTTACCTACAAGATGCAGACAGAAAGCAAGATGAAGATGAAAGTCTTCGGAATTGGATTTCGGAAATAAGAGAAGCTGCTTATGATTCTGATGATGTGATAGAAGCATATGCACTTAAAGGAGCTTCAAGAAGGATGAACATGACAAGTTCTTTGTACAGTATCAAAAGGTGTATTCTAATCATCAAGAGGTTAATTGAAATCCATCAAGTAGGATCCCAAGTTGATGAGATCAGTTCAAGGATAACTAGTCTCACAAGGTGTTTGGAAACTTTTGGCATAAAAAGTGAGAGAGGAGAAGCATCAAATTCTTTACATGGGAGGCAAAAAGCTTTGAGGAGATCTTACTCTCATGTTATTGAAGAGGATATAATTGGTGTTGAGGATGATGTAAAGATTTTGGAGTCGTGTTTGATTAATCCTGTTCATGTATGCGAACCAGTCCACAGTCCACCAAGCACTGAACCTGAAAAGCGTGTGCGTTTGACTTCAAATTCGGCCAGTCCAAATACCAATCAAGGATATAAAGTAGTTGCTATTTGGGGGATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAGGTATATCATAGTACTAAAGTTAGGCACAATTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGAATTTTGTTGAAACTTACTTCACCTTGTAAAGAGTTAAGAGAGGAACTTGTTACTATGAGAGATGAAGAGGTTGCAAAGATGCTTTATGAAGTTCAAGTTGAGAAGAAATGTTTAGTGGTGCTTGATGATATTTGGAGTGTTGGTACTTGGAATAATTTGAGTCCTGCTTTTCCAACTGGAAGATCTTTGTCAGTTGTTGGTAGTAAAATATTGCTAACTACTAGGAACATTGATGTTGCTTTGTATATGGATCCTACTTGTTACCTTCATGAACTAAGATGTTTAGATGAAGATGATAGTTGGGAGTTGTTTCAGAAAAAGGCATTTCCAAAACATAATGATTATGCAGACTCTAGAGTCAGCACAGAGATGGAGAAATTGGGAAGGGAAATGGTTGGAAGATGTGGAGGTTTACCTCTAGCCATCATTGTCCTAGGAGGACTATTAGCATCAAAGCCAACAGTTTATGAATGGGACACAGTGAGACAGAACATCAACTCATACCTTAGGAAAGCAAAAGGCAAAGAACAACTTCTAGGAGTACCTGAGGTACTATCATTCAGCTATTATGAATTGCCTTACCAATTGAAACCATGTTTCCTACACTTAGCCCATTTCCCTGAAAACTTAGAGATACAAACAAAGAAACTGATAAGAATATGGGTGGCAGAAGGTATCATATCATTGGTTCAAAATGAAGGTGAAGGTGAAGAAGCGTTAGAGGACGTGGCGCAGCGTTACTTGACCGAACTTGTGGAAAGGTGTATGATTCAGGTAGTTGAAAAAAGTTCAACAGGAAGAATAAGAACAGTCCAAATGCATAACCTCATGAGGGACTTATGTGTATCTAAAGCATATCAGGAAAACTTTCTTGAAATGATTAATTCATGGAATGTAGATGAAACTAATAGGACTTCACAAGCACGACCGATCGGTAAAGTTCGAAGGATCGCCTTATATCTCGATCAAGATGTCGATAGATTCTTCCCTAAACACCTAAAAAGCCATCACCATCTTAGGTCTATTTTATGCTACCATGAAAAAACAGCTAAGTTAAGTGAATGGAGTTTGACGAAATCAGTTTTCAAAAAATGCAAGTTACTTAGAGTTTTGAATTTAGAAGGAATACAATGTCAAATGGGAAAGTTACCAAAAGAAATTGGTCATTTAATCCATTTAAGGTTTCTAAGTCTAAGAAACACAAAAATTGACGAGTTACCAACATCAATAGGGAATTTAAAGTGCTTACAAACCCTAGATCTTCTAACAGGAAATTCAACTGTTCAAATACCAAATGTTATAGGAAAAATGGAAAAGTTAAGACATTTATATCTACCTGAATCATGTGGCAATGGCATTGAAACATGGAACCTAGCAAATCTGAAAAACTTGCAAACATTGGTTAATTTCCCTGCAGAAAAATGTGATGTTAGAGATCTCATAAAACTAACCAATTTAAGGAAATTGGTTATAGATGATCCTAATTATGGAGAAATTTTTAAATCTAGTGATGTAAAATTTAACCACCTTGAGTCATTGTTTTTTGTTAGTTCTGAAGATACATCAATCCTTGAAGTTTTTGTAGGGTGTCCTAATCTTTACAAGCTACACATTGAAGGACCTATAGTGAATTTTCCACAACCAAATCAAATTTCATCAAAACTTGCTAAGCTTAAGTTGCAAGGTTGTGGATTTGTTGTTGATCCTATGACAACATTGGAGAAGCTACCTAATTTAAGGTTACTTGAGTTACAACTTGATTCATTTTTGGGAAAGGAAATGGTTTGTTCTAACAAAGGTTTTCCTCAATTAAGGTCACTTGTTGTGAGTGATTTGTCTAATCTTGAAGAGTGGAAGTTGGAAAAAGGTGCTATGGCTTGTCTTAGGAAACTTGAGATTTCAAATTGTACTAAGCTTGATGTTGTTCCTGAAGGGCTTAGGTTTGTGACTAGTCTTAAGGATTTGGAGATTAGGTCAATGTTTGCAGCTTTCAAAATCAAACTTGAAAAAGGAGGAGATGAACATTATAAAGTTCAACATGTGCCATCACTGGTATTTCATTATTGTGACTATTAG 2877 0.3625 MAKSIVDFTVQKISDLLIEEAVFLYGVRDKVKQLRTELRRMESYLQDADRKQDEDESLRNWISEIREAAYDSDDVIEAYALKGASRRMNMTSSLYSIKRCILIIKRLIEIHQVGSQVDEISSRITSLTRCLETFGIKSERGEASNSLHGRQKALRRSYSHVIEEDIIGVEDDVKILESCLINPVHVCEPVHSPPSTEPEKRVRLTSNSASPNTNQGYKVVAIWGMGGLGKTTLAKKVYHSTKVRHNFESLAWAYISQHCQARDVWEGILLKLTSPCKELREELVTMRDEEVAKMLYEVQVEKKCLVVLDDIWSVGTWNNLSPAFPTGRSLSVVGSKILLTTRNIDVALYMDPTCYLHELRCLDEDDSWELFQKKAFPKHNDYADSRVSTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTVYEWDTVRQNINSYLRKAKGKEQLLGVPEVLSFSYYELPYQLKPCFLHLAHFPENLEIQTKKLIRIWVAEGIISLVQNEGEGEEALEDVAQRYLTELVERCMIQVVEKSSTGRIRTVQMHNLMRDLCVSKAYQENFLEMINSWNVDETNRTSQARPIGKVRRIALYLDQDVDRFFPKHLKSHHHLRSILCYHEKTAKLSEWSLTKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGHLIHLRFLSLRNTKIDELPTSIGNLKCLQTLDLLTGNSTVQIPNVIGKMEKLRHLYLPESCGNGIETWNLANLKNLQTLVNFPAEKCDVRDLIKLTNLRKLVIDDPNYGEIFKSSDVKFNHLESLFFVSSEDTSILEVFVGCPNLYKLHIEGPIVNFPQPNQISSKLAKLKLQGCGFVVDPMTTLEKLPNLRLLELQLDSFLGKEMVCSNKGFPQLRSLVVSDLSNLEEWKLEKGAMACLRKLEISNCTKLDVVPEGLRFVTSLKDLEIRSMFAAFKIKLEKGGDEHYKVQHVPSLVFHYCDY 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01176 958 CDD RX-CC_like 2 129 IPR038005 -
Car01g01176 958 Gene3D - 5 114 - -
Car01g01176 958 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 13 927 - -
Car01g01176 958 Pfam NB-ARC domain 214 456 IPR002182 GO:0043531
Car01g01176 958 Gene3D Ribonuclease Inhibitor 567 941 IPR032675 -
Car01g01176 958 Gene3D - 455 552 IPR036388 -
Car01g01176 958 MobiDBLite consensus disorder prediction 191 210 - -
Car01g01176 958 Gene3D - 189 355 IPR027417 -
Car01g01176 958 Gene3D - 361 454 IPR042197 -
Car01g01176 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 470 IPR027417 -
Car01g01176 958 PRINTS Disease resistance protein signature 219 234 - -
Car01g01176 958 PRINTS Disease resistance protein signature 298 312 - -
Car01g01176 958 PRINTS Disease resistance protein signature 402 416 - -
Car01g01176 958 PRINTS Disease resistance protein signature 890 906 - -
Car01g01176 958 Coils Coil 31 54 - -
Car01g01176 958 PANTHER DISEASE RESISTANCE PROTEIN RP 13 927 IPR044974 GO:0006952
Car01g01176 958 Pfam Rx N-terminal domain 6 88 IPR041118 -
Car01g01176 958 SUPERFAMILY L domain-like 539 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01176 Car-Chr1 13965916 13970669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01176 627 755 Receptor kinase-like Gene Family AT1G08590 34.532 1.05e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01176 - - gmx:100305356 1340.87