Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01169 ATGTATGAATTGCAACAATTTCAACTTCATCATCAGAATAATCAGATGACAATGAACATGGATCATATGATGATGAAGAAAAGGACAACAAAAAAATTAACGGAGGAAGAGAGGGTTCATGTTGTGGATTTGAATGGCATGTCTTTGGATTCACTTCCTCCTAAACTTTCTATTGATTTAGGTATCATTTGCACGCTAGACTTATCTAACAACAACCTCCAGAATATTCCGGAGTCGTTAACGGCGAGATTATTGAACTTGGAGAAGTTGGATGTGCACTCGAATCGCCTCAGATCACTCCCCAATTCCATTGGATGTCTCTCTAAACTCAAACTTTTGAATGTCTCTGCCAACTTCATCCAATCTCTCCCCGCAACCATTGAGAATTGCAGAGCATTAGAAGAGCTGAATGTCAACTTCAACAAGTTGAGCAAGCTTCCAGACACAATAGGCTTTGAGCTCATAAGACTTAAGAAGCTCGCAGTTAACTCGAACAAACTAGTTTTTCTTCCTAGCTCCACCTCTCACCTAATGGCTCTGAAGGTTCTCGACGCACGCCTAAACTGTCTTAGAGCTCTCCCAGAAAATCTTGAGAACCTCATCAATCTTGAGACTTTGAATGTGAGTCAAAATTTCCAGTACTTGGAATCATTACCCTACTCGATAGGGCTCCTCTTGTCCTTGGTCGAACTGGACATTAGCTACAACAATATCAAAACATTGCCCAACTCCATTGGGTGCCTCAAGAAACTCCAAAAGTTAAGTGTGGAGGGAAATCCACTCAGTTCACCTCCACCAGAAGTGGTGGAGCAAGGATTGCATGTGGTGAAGGAGTACATGTGCAACAAAATGAACTCAAGCGAAAATATTACATCCAAGAAAGGATGGTGGATCGGGAAGTTGGTTAAATGTGGTACCTTCAATGGACACATGAAAAGTGGGAAACGATTAGAACATAAGGGTTTCAGCATGCTTCAGTATCAACCCATGAATGGTCTTGCTTCACCAGGGTTCATGGGAAAGTTGTCACCTTTTCGCCTCTTCTCACCCTTTTCACCACGTCGTTCCTTCGGCTGA 1077 0.4234 MYELQQFQLHHQNNQMTMNMDHMMMKKRTTKKLTEEERVHVVDLNGMSLDSLPPKLSIDLGIICTLDLSNNNLQNIPESLTARLLNLEKLDVHSNRLRSLPNSIGCLSKLKLLNVSANFIQSLPATIENCRALEELNVNFNKLSKLPDTIGFELIRLKKLAVNSNKLVFLPSSTSHLMALKVLDARLNCLRALPENLENLINLETLNVSQNFQYLESLPYSIGLLLSLVELDISYNNIKTLPNSIGCLKKLQKLSVEGNPLSSPPPEVVEQGLHVVKEYMCNKMNSSENITSKKGWWIGKLVKCGTFNGHMKSGKRLEHKGFSMLQYQPMNGLASPGFMGKLSPFRLFSPFSPRRSFG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01169 358 ProSiteProfiles Leucine-rich repeat profile. 86 107 IPR001611 GO:0005515
Car01g01169 358 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 350 - -
Car01g01169 358 SUPERFAMILY L domain-like 35 294 - -
Car01g01169 358 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 350 - -
Car01g01169 358 SMART LRR_bac_2 200 221 - -
Car01g01169 358 SMART LRR_bac_2 225 244 - -
Car01g01169 358 SMART LRR_bac_2 177 196 - -
Car01g01169 358 SMART LRR_bac_2 130 149 - -
Car01g01169 358 SMART LRR_bac_2 60 79 - -
Car01g01169 358 SMART LRR_bac_2 84 103 - -
Car01g01169 358 SMART LRR_bac_2 154 173 - -
Car01g01169 358 SMART LRR_bac_2 107 126 - -
Car01g01169 358 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Car01g01169 358 ProSiteProfiles Leucine-rich repeat profile. 62 83 IPR001611 GO:0005515
Car01g01169 358 SMART LRR_typ_2 225 247 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 154 176 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 60 83 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 131 153 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 177 200 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 248 271 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 84 106 IPR003591 -
Car01g01169 358 SMART LRR_typ_2 107 130 IPR003591 -
Car01g01169 358 Gene3D Ribonuclease Inhibitor 152 281 IPR032675 -
Car01g01169 358 Gene3D Ribonuclease Inhibitor 2 151 IPR032675 -
Car01g01169 358 Pfam Leucine rich repeat 225 261 IPR001611 GO:0005515
Car01g01169 358 Pfam Leucine rich repeat 86 143 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01169 Car-Chr1 13811395 13814534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01169 60 266 Receptor kinase-like Gene Family AT2G15080 34.419 1.27e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01169 - - gmx:100776295 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00304 07 2752581 2754453 Car01g01169 01 13811395 13814534 PCT