Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01161 ATGTGGTTTGCGTTCTGGAGACCCAAAGATCGTTTTTCCTTGGATCAACTCAGGTACTTAGCTGATCAGTTGACAAAAGTTCAAATAGTTAATGAGGTTAATAAGGATTTTGTTATCGAGGCACTAAGATCAATTGCGGAGTTGGTAACATATGGCGACCAACATGACCCAAGCTTTTTTGAATTTTTCATGGAAAAGCAAGTAGTGGGTGATTTTGTACGTATTCTAAAACTTAGCAGGACTATAAGCATTCCTCTTCAGTTGCTACAAACAGTGAGCATTATGATCCAGAACCTTCAAAGTGAACATGCTATATATTATATGTTTAGTAATGAACATATGAACTACCTAATTACATATGCATTTGATTTCCGCAATGAAGAGCTATTGTCATACTACATATCTTTTTTAAGAGCAATAAGCGGGAAATTGAACAAGAATACTATTTCACTTCTTGTGAAGACGCGCAATGACGAAGTAGTTTCATTTCCACTGTATGTTGAGGCGATACGCTTTGCCTTTCATGAGGAGAATATGGTTCGTGCTGCTGTACGTGCTGTGACCCTTAATGTTTATCACGTTGGAGATGACTCTGTTAATAGATATATAACTAGCGCACCTCACACAGATTACTTCTCAAATCTGGTTTCCTTTTTTAGGAAGCAGTGTATGGGTTTAAACAGACTGATCTCTGAGACGCTAAAAAATCCAGGCCCAGATTCAAACTCTACTGTTACTGCTGCTGTAGATGAAATTGAGGATAACCTGTATTACTTCAGTGATGTGATCTCTGCTGGAATTCCTGATGTTGAAAGGTTAATAACAGACAGCATTCTGATGCTTCTGATTTTTCCAGTACTTCTTCCTTCCCTGAGGATGGTGGCTGTTAATGATATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTGAAGATAGTCAAGATCAAAGATTTGGCAAATACAATAGTTGCTGCTCTTTATTACCCCTTAAAGTCCTTTACAAAATGTTCTGGGAGTCAAGTCAATGGCTATATACCTGATCATGGTTTTACATCTGAAAGCGAAGGGACATGTAATGATAATCTTGCTCAGAATAATACGGAAGGCTTGAAGGTCAATGTGCCATGCTCATCTAGTTCTTCAGGTTCTCATCAACAAAGTGTCACCATGCTAAATAACGGTAGCAGTTCGAATGCGGCTTTGAGGGAAGTTTTGCTTGAATATGTAACTGAAGGGGATGACGTACAAGTTTTGGGTTCCTTGAGTGTGCTTGCCACTCTATTGCAAACTAAAGAACTTGATGAGTCAATGCTAGATGGGCTTGGAATTCTTCCACAACGCAAACAGCACAAAAAGCTCTTATTGCAAGCTTTGGTTGGCGAGGCTTCAGAGGAAGAGCAACTTTTTTCTTCTGAAAGTAGCTTGACTAGAGATGGCATTGCCTGTGAGCTTGATGTTTATCTTGAAAAGATCAAGGAGCATTATGGGGTATCTTTCCAGCCTTCAAATGTGGGATCCAGCCCTCGTGTACCTAGATTTCAGGTTCTTGATGCATTAGTGAGCCTCTTTTGCCGTTCTAATATATCGGCAGAGACATTATGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCATACAGTAAGGCAGAATTCAACAACCACCACCTGGAATTGCTGAAAATTTCATACGAGAATTCTGCTTCTGCTCTTGAAAAGGAAGTTAGAGGTTTCTGGCCTGACCTTCTTATTACTGTTCTTTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGAGTCCTCATCCCCTCCAAAAGAACCAAAGTGCATACTTTATCCACCTCGAATGTTCTTTTCAGAAGAAGATATACCTGAGGGATCATCATTTACTGCTGGAGAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTACTGCACCAACTTCAAATATTCACTCTTGGTAGAGCTTTGCCTGAGGAACCTCTTATTTATCATCCATGTGATCATGGTACAAATTCTCGTGCCCAAACTTCTGGGCTTATGTCAGTCCCAAAGCCAGGCACTGAAATCAACCTCGTTAATGCCGTACCTTGTAGAATTGCTTTTGAGAGGGGCAAAGAACGTCATTTTTGCTTTCTAGCAATCTCTGTAGGAACATCTGGTTGGCTTGTGCTTGGAGAAGAATTTCCGCTGAAGAAGCCTTACGGAGTTGTTCGGGTTGCTGCGCCGTTGGCTGGATGCAATCCTAGGGTTGATGATAAGCATTCAAAATGGTTACACCTGCGGATCCGACCATCCGCTTTACCTTTTCTGGACCCTGTCAAGTACAATCCACATGGGAAGTTAAAGACAAAAGCTTTTGTTGATGGAAGATGGATATTGGCGTTCAGAGACGAGGAGTCTTGTAAAACTGCTTTTTCCATGATTCTTGAAGAGATTAATTATCTGTGTGAGGAGGTTCATAGAAGAATAAAACCTTCGCTCAAGCTTGAAACTGCGATAGATATATCAAGCTCGTCTGCACCTGTTTCAGAAGATTCCTCTTCACATACAACACCTCCCAATTCATTGTAA 2583 0.4073 MWFAFWRPKDRFSLDQLRYLADQLTKVQIVNEVNKDFVIEALRSIAELVTYGDQHDPSFFEFFMEKQVVGDFVRILKLSRTISIPLQLLQTVSIMIQNLQSEHAIYYMFSNEHMNYLITYAFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTRNDEVVSFPLYVEAIRFAFHEENMVRAAVRAVTLNVYHVGDDSVNRYITSAPHTDYFSNLVSFFRKQCMGLNRLISETLKNPGPDSNSTVTAAVDEIEDNLYYFSDVISAGIPDVERLITDSILMLLIFPVLLPSLRMVAVNDMQSGVVTSLYLLCCILKIVKIKDLANTIVAALYYPLKSFTKCSGSQVNGYIPDHGFTSESEGTCNDNLAQNNTEGLKVNVPCSSSSSGSHQQSVTMLNNGSSSNAALREVLLEYVTEGDDVQVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEASEEEQLFSSESSLTRDGIACELDVYLEKIKEHYGVSFQPSNVGSSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSKAEFNNHHLELLKISYENSASALEKEVRGFWPDLLITVLCDEWRKCKRAMESSSPPKEPKCILYPPRMFFSEEDIPEGSSFTAGERMHELVKVFVLLHQLQIFTLGRALPEEPLIYHPCDHGTNSRAQTSGLMSVPKPGTEINLVNAVPCRIAFERGKERHFCFLAISVGTSGWLVLGEEFPLKKPYGVVRVAAPLAGCNPRVDDKHSKWLHLRIRPSALPFLDPVKYNPHGKLKTKAFVDGRWILAFRDEESCKTAFSMILEEINYLCEEVHRRIKPSLKLETAIDISSSSAPVSEDSSSHTTPPNSL 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01161 860 PANTHER PROTEIN TRANSPARENT TESTA 9 1 843 - -
Car01g01161 860 PANTHER UNCHARACTERIZED 1 843 IPR039272 -
Car01g01161 860 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01161 Car-Chr1 13590003 13606343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01161 K19513 - gmx:100786267 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00299 07 2708422 2719176 Car01g01161 01 13590003 13606343 PCT