Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01142 ATGGACTCTGAACCCCAATCcaaaaagaaaacaaaaaacaaaaagaaaaagcaaaCTGAACCTGAGCCTGAACCGGTTCAGGCAAAAGTCAAAGTTGTCCGTGAGAATCCAAACAAAATACCTCCATATATTGGTTATTTTCCTTCTGGTTTTGATCCGGTGAAGTCGACTTCTGTTTCGGCCGGTTTCCAAGTATATCGAAACAAGAACATGACTAAGAGGCTTGAGCTTGTTGTTAGTCCTGCTGGCTCTTCGGTTGATTTCGTCGGAACAAATTATATGGGTGAGGCTACGGGCTCACACCGATCAATGTATGCTCTTGGTGTGTTTGATAAGGAATCTCAGACACTTAAGGTTGTGCCTATTGGTGCTAACAAGATATTCAGATTGGATCCCAAAGTTAAAGGCGTTGAATATAACTTATATAAGGAGTCTGCGAATGGGACGGTAGAGGAGTTGAGCCCAGAGCAGACGGCAGCGAAAAGGCGACATTCTACTGCTGTTTTGGGAACAAAGAGGCATATTGAGTCGACTAATAAGATTCTTGATATGAGAAAAGATGACGAACCTGAGTCTAAAAAAAATCTGGTTGAGAAAATGAAAAATGTTGTTGTAAATGAAGCGGCTCTTGCAAATACAGAAGCTACTGTTTCTCGCAATATACCACCATATGATACTTCTGCGACTACACCTCAGGAGGCTTATGTATTGGACAGAATCATCCTTGAGAGAGAATGGAGTTATCTTGAAGACATTTATTATATTTTGGAACAGGGAGAAGCAGCAAACTTCAGTGCTTACCCAATATTTATTCGCAACAGGATAGGCAGATTAAAGAAGATTGAGGATGAGTCAGAAAAGAAGAAGCAATTTTGCATACTCTCATACATCAACCATCTTATCAAGTTCAAAGATCAGCACTCTATGGATGGTGTTTCCTCTGCAAAGTCCCACAAAATTCCCACTATTTTGCGTTCTAAATTTTTAACGATGTTTGATGTTTCTGAATCAAAAAGGCTGCCAACTGAAAAGATTAATCTTCTCATTTCTTATGTTTTGGTGCTCACACTTTTCATCGATGGGTTCCAAACTGACTACAAAGATATAGCAAAGGATCTGAGGATGTCTCTAATACCCCTAAGACTCCTCTATGAGCATTTGGGTGGCAAAATTGTATTCCAGGACAAGAAATCCTATGCCATACTTCCTATCCCACTTACATTCCCTGAGTTAAAGCAAAAGAAGAGGAAAAGATAG 1257 0.3914 MDSEPQSKKKTKNKKKKQTEPEPEPVQAKVKVVRENPNKIPPYIGYFPSGFDPVKSTSVSAGFQVYRNKNMTKRLELVVSPAGSSVDFVGTNYMGEATGSHRSMYALGVFDKESQTLKVVPIGANKIFRLDPKVKGVEYNLYKESANGTVEELSPEQTAAKRRHSTAVLGTKRHIESTNKILDMRKDDEPESKKNLVEKMKNVVVNEAALANTEATVSRNIPPYDTSATTPQEAYVLDRIILEREWSYLEDIYYILEQGEAANFSAYPIFIRNRIGRLKKIEDESEKKKQFCILSYINHLIKFKDQHSMDGVSSAKSHKIPTILRSKFLTMFDVSESKRLPTEKINLLISYVLVLTLFIDGFQTDYKDIAKDLRMSLIPLRLLYEHLGGKIVFQDKKSYAILPIPLTFPELKQKKRKR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01142 418 MobiDBLite consensus disorder prediction 1 28 - -
Car01g01142 418 Pfam A49-like RNA polymerase I associated factor 63 409 IPR009668 GO:0003677|GO:0006351
Car01g01142 418 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 8 418 IPR009668 GO:0003677|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01142 Car-Chr1 11754101 11762575 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01142 K03005 - gmx:100812427 493.812