Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01140 ATGGTGACTAAAGAAGAGAAAAAAGAGATAAAAATTGTTCTTACAAAGCCACTACAACTAGAAAAGGAATCAAATTCAGAAGAGAATTACAGAGCCCCTAATCTTTTACAACGTTTATTAAGTTTATTCAATAATGTACGTCCAGGATCTGATCTCACACGCTTTCAGCTGCCACCACTATTTAACTTACCAAAATCACAACTTCAATGCTATGGTGAATCAGTGTATTGCAGTGCCTCAGATATGTTAAGCATATGTAACAGAGGACAGAGTCCATTGGATAGGTTCATAAGTGTTGTAGCATGGTGCATATCTACTACACGCCCTGCATCTTTTGGTGTTGCTCCTTATAATCCTATTCTTGGTGAGACACACCATGTTTCAAAGGGAAATCTTAATGTTTTACTTGAACAGGTTTCACACCATCCTCCAGTAACTGCTCTCCATGCAACAAATGAAAAGGAAAACATAGAAATGATATGGTCTCAGCAACCTGTTCCAAAATTTTATGGCACATCCATTGAAGTAAAAGTAGATGGTAAAAGGAAATTAAAGCTCTTAAATCATGGGGAAACATATGAGATGAATTGTCCTCACCTTTTATTTAGAATTCTTCCAATTCCAAGTGCTGATTGGGTTGGCACAGTTGATATAAGGTGCCTAGAGACAGGCCTAGTAGCTGAGCTATCCTACAAATCAAGTCACTCTTTTCTAGGACTTGGTGGAAATCATAAAGTGATCAAAGGGAAAATCATTGACTCTTCATCCTTGAAAGTTCTATATGATGTTGATGGTCATTGGGATAGGATTGTAAAACTGAAGGATAGAAAAAATGGGAAAGTTAGAGTGATATATGATGCAACAGAGGTTATTTCAGGTTTACAAGCTCCTATTCTCAAGGATGTAGAGAGTGTGTGGCCAACAGAATCAGTGAATGTTTGGAGTGAATTGAGCCAAGCTATACTAAGCAAAGATTGGGAGAAAGCAAGAGAAGCAAAGCAAGTAGTGGAAGAGAGACAAAGGGAGCTCATGAGAGAATTTGAGTCAAAAAGACAAAATTGGATTCCTAAACATTTTGTAGTGTCTTACACCAAAGAAATAGGGTGGCACTGTTCACCTATTCATAACTCTGTAACACCTGCTCCTATCATAGCCCTATAA 1161 0.3773 MVTKEEKKEIKIVLTKPLQLEKESNSEENYRAPNLLQRLLSLFNNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCSASDMLSICNRGQSPLDRFISVVAWCISTTRPASFGVAPYNPILGETHHVSKGNLNVLLEQVSHHPPVTALHATNEKENIEMIWSQQPVPKFYGTSIEVKVDGKRKLKLLNHGETYEMNCPHLLFRILPIPSADWVGTVDIRCLETGLVAELSYKSSHSFLGLGGNHKVIKGKIIDSSSLKVLYDVDGHWDRIVKLKDRKNGKVRVIYDATEVISGLQAPILKDVESVWPTESVNVWSELSQAILSKDWEKAREAKQVVEERQRELMREFESKRQNWIPKHFVVSYTKEIGWHCSPIHNSVTPAPIIAL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01140 386 Coils Coil 333 353 - -
Car01g01140 386 SUPERFAMILY Oxysterol-binding protein-like 38 371 IPR037239 -
Car01g01140 386 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 384 IPR000648 GO:0008289
Car01g01140 386 Gene3D - 121 296 - -
Car01g01140 386 Gene3D - 306 378 - -
Car01g01140 386 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 2 384 - -
Car01g01140 386 Pfam Oxysterol-binding protein 43 315 IPR000648 GO:0008289
Car01g01140 386 ProSitePatterns Oxysterol-binding protein family signature. 137 147 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01140 Car-Chr1 11711775 11719741 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01140 K22285 - gmx:100813724 631.713