Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01136 ATGAAGAAAAACTACAAAACCCCATCTCGCGCGTGGGACTCACTCATCCGTGGTTTTTGCTTCACGCGCCAAGACCCAGATAAGACACTCTCCGTTTTGCGACATTGTTTGGTAAACCGTAACGTTTTCCTCTCTTCCTCAGTTTTTTGTTGCGTAATTCAAAATCTTTGCTATTTGGGTCATGTGAGTAAGGCTATTCAGGTTCTTGAATTGATGGCTGAACATAGAAAGGAGTACCCTTTTGATGATTTTGTTTGTAGTTCGGTGATTTCGGCTTTTTGTAGGGTTGGAAAACCAGAACTTTCGCTGTGGTTCTTCGACAATGTCGCGCGCTCGAGAGGCGCGTGGCGGCCTAATCTTGTGACTTGTACTGCTATTGTGAATGCTCTTTGTAAGTTAGGGAGGGTTCATGAAGTTTATGATTTGGTTCGTAGGATGGAGGAAGATGGGTTGGGTTTGGATGTTGTTTTGTATAGTGTTTGGGTTTGTGGGTATGTTGAAGAAAAGGTTTTGGTTGAGGTTTTTAGGAAGATGAGAGAAATGGTTTTGGAAAAGGGTATATCTCATGATTCTGTTAGTTATACTATACTTATAGATGGGTTTTCTAAGTTAGGTGATGTTGATAAGTCTTTTACTTTTTTGGCTAAGATGATTAAAGAAGGGCATAGACCTAATAAGGTTACTTATACTGCTATAATGTCTGCATATTGTAAGAAGGGTAAAGTTGAGGAAGCATTTGGTGTTTTTGAGAGGATGAAAGATTTGGGAATTGAGCTTGATGAATTTGTGTTTGTTGTTTTGATTGATGGGTTTGGAAGGATAGGTGATTTTGATAGTGTGTTTCGATTGTTTGATGAAATGGAGAAGAGAGGGATTAGTCCGAGTGTTGTAACATACAATGCTGTTGTAAATGGTTTGTCAAAGTATGGAAGGACACAGGAGGCGGACAAGTTCTCGAAAAACGTGACTGCGGATGTGATTACGTATAGTACGTTGTTGCACGGGTATACAGAAGAGGAGAACGTTTTGGGGATTTTGGAAACGAAGAAGCGGCTTGAAGAAGCTGGTATCACTATGGATGTTGTAATGTGTAATGTATTGATTAGAGCATTGTTTATGATGGGTTCTTTTGAAGATGTTTATACACTTTACAAAGGAATGCCAGAAATGGATCTGGTTCCGAATTCTGTTACGTACTGCACGATGATTGATGGGTATTGCAAAGTTGGTAGAATTGATGAGGCACTTGAGGTATTTGATGACTTCAGAAAGACATCAATATCTTCGTATGCGTGCTACAATAGTATTATTGACGGACTTTGCAAGAAGGGTATGGTAGAAATGGCCATTGAAGCATTACTTGAACTCAATCACAAAGATCTCGTGTTGGATACAGGTACATATTGGTTTTTGATGAAGACGATTTTCAAAGAAAACAGTTCAAAAGTGATTTTAGATTTGATTTGCAGAATGGAAGGGTTGGGGCCAGATTTATATAATGTGGTATGTAACGATTCCATATTTTTATTGTGTAAAAGAGGATTACTCAATGATGCAAATCAATTGTGTGTGGCAATGAAAATGAAAGGGTTACCTGTCACATGCAAGTCTTATTATTCACTTTTGAGAAGGCTTCTTAGTGTTGGGAATAGGGAGCAAACTCTGCCTCTTTTGAATTTTTTTTTGAAAGAGTATGGTTTAGTAGAACCAAAGGTTCGAAAGTTACTTGCACGTTACCTTTGTCTGAAAGATGTTGATAGAGCTGTTCAATTTCTTGGAAAAATGTTGGACAATTCTTCAGCAGTCACTTTTCCTGCCTCCATTCTCAAGATACTCATAAAGGAAGGTAGAGCTTTAGATGCATATAAGCTTGTCGTGGGTGTTCAAGATGATTTACCGGTCACGTATGTTGATTATGCCATTGTGATTCATGGCTTATGCAAAGGAGGATATCTCAATAAAGCATTGGATCTTTGTGTTTTTATTGAAAAGAAGGGGATGAATTTGAACATAGTCATACATAATTCAATCATAAATGGATTATGCAATGAGGGTTGTCTTATTGAAGCGTTTCGGCTATTTGATTCTTTAGAGAAACTTAATTTGATGACCTCTGAAATAACTTATGCTACATTAATTTATGCTCTATGTCGGGAAGGTTATTTGCAAGATGCCGAACATGTTTTCAAGAAAATGCTCCTCAAGGGATTTCAACCAAAAACACAAGTCTACAATTCATTACTCGATGCTATATCTAAGTTCGGACAATTAGACAAGGCATTTGAGCTTCTAAATGATATGGAGAAAAATTGTATCGAGTTCAACAATTTTACAGTTAGTTCTGTAATAAATTGCTATTGCAAGAAGGGTGACATGGAAGGAGCCCTTGAATTCTATTATAAGTTCAAGGGAAAGGATATATTACCCGATTTTTTAGGGTTCTTGTATTTGATAAGAGGTCTATGTACCAAGGGAAGGATGGAAGAAGCCAGGAGTGTCTTGAGAGAAATGCTTCAGTCCGAGAATGTCACAGATACGATTAACATAGTCAACAGCGAGGTTGATACTGAGTCAATATATGATTTTCTTGCCACTTTGTGTGAGCAAGGAAGCATTCAAGAAGCTGTTACGGTTCTCAATGAAATCGCGTGCATGTTTTTTCCTGTTCAAAGGTTGTCTACTTATAATCAAGGATCTGATAAATCACAGAAGATTTACGAACCGAAGGGTTTTGGTTCAAATTCTTCCATGTCTCTACCTTCGTATTGCAAAAGTGGTTTGGATTCTGGATCTTGTGATACCGGGGATGTAAGGAATCAAATGACAAATAACGATAGTTATTTGAAAAGATCCAAACAGCGCGGCTTTGATTTCTATTATTCTAGAATTGCTGCACTTTGTACCAAAGGGGAGATGCATGAAGCTAATCAATTAGCAAAGGAAATCATTTCTGACCTGAAAGAGCCTATGAAATGA 2976 0.3784 MKKNYKTPSRAWDSLIRGFCFTRQDPDKTLSVLRHCLVNRNVFLSSSVFCCVIQNLCYLGHVSKAIQVLELMAEHRKEYPFDDFVCSSVISAFCRVGKPELSLWFFDNVARSRGAWRPNLVTCTAIVNALCKLGRVHEVYDLVRRMEEDGLGLDVVLYSVWVCGYVEEKVLVEVFRKMREMVLEKGISHDSVSYTILIDGFSKLGDVDKSFTFLAKMIKEGHRPNKVTYTAIMSAYCKKGKVEEAFGVFERMKDLGIELDEFVFVVLIDGFGRIGDFDSVFRLFDEMEKRGISPSVVTYNAVVNGLSKYGRTQEADKFSKNVTADVITYSTLLHGYTEEENVLGILETKKRLEEAGITMDVVMCNVLIRALFMMGSFEDVYTLYKGMPEMDLVPNSVTYCTMIDGYCKVGRIDEALEVFDDFRKTSISSYACYNSIIDGLCKKGMVEMAIEALLELNHKDLVLDTGTYWFLMKTIFKENSSKVILDLICRMEGLGPDLYNVVCNDSIFLLCKRGLLNDANQLCVAMKMKGLPVTCKSYYSLLRRLLSVGNREQTLPLLNFFLKEYGLVEPKVRKLLARYLCLKDVDRAVQFLGKMLDNSSAVTFPASILKILIKEGRALDAYKLVVGVQDDLPVTYVDYAIVIHGLCKGGYLNKALDLCVFIEKKGMNLNIVIHNSIINGLCNEGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMLLKGFQPKTQVYNSLLDAISKFGQLDKAFELLNDMEKNCIEFNNFTVSSVINCYCKKGDMEGALEFYYKFKGKDILPDFLGFLYLIRGLCTKGRMEEARSVLREMLQSENVTDTINIVNSEVDTESIYDFLATLCEQGSIQEAVTVLNEIACMFFPVQRLSTYNQGSDKSQKIYEPKGFGSNSSMSLPSYCKSGLDSGSCDTGDVRNQMTNNDSYLKRSKQRGFDFYYSRIAALCTKGEMHEANQLAKEIISDLKEPMK 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01136 991 PANTHER ATPASE EXPRESSION PROTEIN 3 663 987 - -
Car01g01136 991 PANTHER ATPASE EXPRESSION PROTEIN 3 7 476 - -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 775 809 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 395 429 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 810 844 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Car01g01136 991 Pfam PPR repeat family 670 718 IPR002885 -
Car01g01136 991 Pfam PPR repeat family 224 271 IPR002885 -
Car01g01136 991 Pfam PPR repeat family 739 788 IPR002885 -
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 429 505 IPR011990 GO:0005515
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 562 715 IPR011990 GO:0005515
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 24 170 IPR011990 GO:0005515
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 171 271 IPR011990 GO:0005515
Car01g01136 991 Pfam Pentatricopeptide repeat domain 320 370 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 360 394 IPR002885 -
Car01g01136 991 PANTHER FERTILITY RESTORER-LIKE 606 667 - -
Car01g01136 991 PANTHER FERTILITY RESTORER-LIKE 663 987 - -
Car01g01136 991 PANTHER FERTILITY RESTORER-LIKE 7 476 - -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 740 774 IPR002885 -
Car01g01136 991 Pfam PPR repeat 185 217 IPR002885 -
Car01g01136 991 Pfam PPR repeat 391 421 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 705 739 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 273 320 IPR011990 GO:0005515
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 321 428 IPR011990 GO:0005515
Car01g01136 991 SUPERFAMILY TPR-like 682 880 IPR011990 GO:0005515
Car01g01136 991 Gene3D Tetratricopeptide repeat domain 716 910 IPR011990 GO:0005515
Car01g01136 991 PANTHER ATPASE EXPRESSION PROTEIN 3 510 563 - -
Car01g01136 991 Pfam PPR repeat 432 456 IPR002885 -
Car01g01136 991 Pfam PPR repeat 639 666 IPR002885 -
Car01g01136 991 Pfam PPR repeat 297 317 IPR002885 -
Car01g01136 991 Pfam PPR repeat 121 151 IPR002885 -
Car01g01136 991 Pfam PPR repeat 85 107 IPR002885 -
Car01g01136 991 Pfam PPR repeat 817 839 IPR002885 -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
Car01g01136 991 PANTHER FERTILITY RESTORER-LIKE 510 563 - -
Car01g01136 991 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 190 224 IPR002885 -
Car01g01136 991 PANTHER ATPASE EXPRESSION PROTEIN 3 606 667 - -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 707 739 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 778 810 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 432 464 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 121 154 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 192 225 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 817 840 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 263 296 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 743 775 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 672 699 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 397 427 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 227 261 IPR002885 -
Car01g01136 991 TIGRFAM PPR: pentatricopeptide repeat domain 362 395 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01136 639 989 Glycosyltransferase AT1G05670 26.197 2.83e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01136 - K17964 gmx:100783405 1453.34