Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01120 ATGTTGGGTGGTACACTCTCAACCCCAACAACACAAAACCTCAAACCAACAAAAACAACAACAATGATTTCTCCTTCTCATAGATTATTGTCTACACATTTTTGTATCTTTAAGAATCTTATATCAGGTACTAGAAGATTATCCTCAAAAGAAAGTTGTTTTCTCAGTGGTCAACAAATTAATATTAAGCAAATTTTTGGGCTTATTTCTGGTCGTGCTCCAAGAAAGAAAACAGGGTTTGTATTTTCTCCAAGATGTGTCCTGCCACTGACAGAAGAGAATGTGGAGAGGGTTTTGGATGAGGTAAGGCCAGGCTTGATGGCTGATGGAGGGAATGTAGCCTTGCATGAGATAGATGGTCTTGTTGTTATCCTCAAGCTACAAGGAGCGTGTGGATCATGTCCTAGCTCAACAATGACATTGAAGATGGGAATCGAAACTCGCCTCCGCGATAAGATTCCGGAAATCTTGGAAGTTGAGCAGATACTAGATACTGAGACTGGTCTTGAGTTAACTGAAGAAAATGTTGAAAGTATTCTTTCAGAAATTAGACCATATCTTGTTGGCACTGGAGGAGGAACATTAGAGCTTGTTGAGATTAATGATTATGCTGTCAAAGTTCGGTTAAGTGGACCGGCCGCAGGAGTTATGACGGTTCGCGTTGCGTTAACACAAAAGCTGAGAGACAAGATACCTTCTATTGCTGCTGTGCAACTAATAGAATGA 726 0.405 MLGGTLSTPTTQNLKPTKTTTMISPSHRLLSTHFCIFKNLISGTRRLSSKESCFLSGQQINIKQIFGLISGRAPRKKTGFVFSPRCVLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEENVESILSEIRPYLVGTGGGTLELVEINDYAVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01120 241 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 92 166 IPR034904 -
Car01g01120 241 Pfam NifU-like domain 176 238 IPR001075 GO:0005506|GO:0016226|GO:0051536
Car01g01120 241 Pfam NifU-like domain 95 160 IPR001075 GO:0005506|GO:0016226|GO:0051536
Car01g01120 241 Gene3D - 87 169 IPR034904 -
Car01g01120 241 Gene3D - 170 241 IPR034904 -
Car01g01120 241 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 15 241 - -
Car01g01120 241 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 170 240 IPR034904 -
Car01g01120 241 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 15 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01120 Car-Chr1 11292392 11295477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01120 - - gmx:100806364 348.591