Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01092 ATGACAGGAAAATCTATTGTCTGCTCCTTGCTTCTTTGTTTCATTGTAATTGGTGTTTATGGTGAGAATTTTTCTTCTAGGACAATTCCTAATGGCAAGCATCTTGAAGCAATACATAGATTAAAGTCATTCAAGGCATCTTTAACAAGACATGATTCCATTGCTTCAACACCATCATCTTCCGTCTCACCTTCAACTTCTTCTCAGCTAACTGAGGGTATGAACCAAACAAGAGAATACCGTGTGACATCGTATGGTGCAGACCCAACAGGGAATTTAGATAGCACAGAAGCAATACTTGCAGCCATAGCAGATGCAGCAAATGGTGTAAGTGAAGGAAATTTGTTGGAAGGAATCAGAAACCTTGGAGGTGCACAAATCAATCTTGAAGGTGGAAATTACTTGATCAGCAGGTCACTCAAGTTGCCGGAAGCCGGTGTTGGAAACCTCATGATACATGGTGGAACAATAAAAGCCTCAGATAATTTTCCTGAAGAAGGGTACATTATTGATTTATCACCCTCATCAAATTCATCTTCATCATCCTACAATTTTGAGTACATAACTCTGAAAGACCTGTTATTGGATTCAAAGTATAGAGGAGGAGGAATTTCAGTAATAAATTCAGTTAGAACAAACATAGAGAATTGTTACATTACACATTTCACAACAAATGGAATATTAGTAAAAAGTGGACATGAAACATACATCAGAAACTCATTCATTGGTCAGCATATTACAGCCGGCGGCGATCAACAAGAAAGAAACTTCACAGGCATAGGAATAAACCTTCAAGGTAATGATAATGCTGTCACAGATGTTGTGATTTTCTCTGCTGATATTGGAATCTTGGTTACTGGTCAAGCCAACACATTTTCTGGTATACATTGTTACAATAAAGCCACTGGTTTTGGTGGCACTGGAATTTATTTGCAACTTCCTGGTTTAACTCAAACAAGGATTGTGAATTCTTATATGGATTACACAAGCATTGTTGCTGAAGATCCTGTTCAACTTCATATTTCAAGTACCTTCTTCCTTGGTGATGCTAATATTGTCTTCAAATCTATCCATGGTGTTGTCAATGGTGTTACTATTGTTGATAACATGTTCTCTGGTTCAAATCAAGGTGTTGAAATTGTTCATTTGGATGAATCAAATAATAGTAATTTTCATGAAATAGATCAAGTTGTTGTTGATAGGAACATTGTAAGGGGAATGAAATTAAAGGCTACAGTTGCAAAaatgagtatggaagggaatggaagtttatggaatgTTGATTTTAATAACATTCTTATATTTCCTAATCTTATTAAAAATGTTCAGTACTCATTAAGTTCTGTTGGAACTACTTTTCCTAATCATGCTTTGAGGAATGTTTCGGATAATAAAGTTGTGATTCAAACCAATGAAGCTGTTGTTGCTAATGTTTTTGTCACGGTGGATCAAAGCGGGGCGAGTTGA 1467 0.3538 MTGKSIVCSLLLCFIVIGVYGENFSSRTIPNGKHLEAIHRLKSFKASLTRHDSIASTPSSSVSPSTSSQLTEGMNQTREYRVTSYGADPTGNLDSTEAILAAIADAANGVSEGNLLEGIRNLGGAQINLEGGNYLISRSLKLPEAGVGNLMIHGGTIKASDNFPEEGYIIDLSPSSNSSSSSYNFEYITLKDLLLDSKYRGGGISVINSVRTNIENCYITHFTTNGILVKSGHETYIRNSFIGQHITAGGDQQERNFTGIGINLQGNDNAVTDVVIFSADIGILVTGQANTFSGIHCYNKATGFGGTGIYLQLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSTFFLGDANIVFKSIHGVVNGVTIVDNMFSGSNQGVEIVHLDESNNSNFHEIDQVVVDRNIVRGMKLKATVAKMSMEGNGSLWNVDFNNILIFPNLIKNVQYSLSSVGTTFPNHALRNVSDNKVVIQTNEAVVANVFVTVDQSGAS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01092 488 Gene3D - 80 488 IPR012334 -
Car01g01092 488 MobiDBLite consensus disorder prediction 52 74 - -
Car01g01092 488 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 10 488 - -
Car01g01092 488 Pfam Pectate lyase superfamily protein 82 303 IPR024535 -
Car01g01092 488 SUPERFAMILY Pectin lyase-like 78 462 IPR011050 -
Car01g01092 488 SMART pbh1 266 287 IPR006626 -
Car01g01092 488 SMART pbh1 209 231 IPR006626 -
Car01g01092 488 SMART pbh1 361 382 IPR006626 -
Car01g01092 488 PANTHER POLYGALACTURONASE QRT3 10 488 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01092 Car-Chr1 10804390 10806977 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01092 - - gmx:100804107 730.324