Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01091 ATGGCTTCAAACACCATGGCTGGTTTGATCACTGGCTCCAATTCTCATTTTTCTCATGACTCTGATGAGCATAAGGCTCCTACGGGCCGTCAATCTTCATTGAAAACATGTCGAGTTTGTGGCGATGAGATTGGATATAAGGAAAATGGAGAGCTTTTTGTGGCTTGTCATGTGTGTGGATTTCCTGTTTGTAAACCTTGTTATGAGTATGAGAGGAGTGAAGGGAATCAATGTTGTCCTCAATGCAACACTCGCTATAAGCGCCATAAAGGTTGTCCAAGAGTGGTTGGAGATGAAGAAGAGAACCTTGATGGAGATGATTTTGAAGATGAGTTTCCGATTAAGAATCACTACGATGAACTAGACCAGCATCGCGATGTTAATCATCTGGATTTGGAAGGGGAGAAAGAATTCTACAGCAATGCAGAATGGaaagaaagagtagagaaatggaaagtaaggcaagaaaagaGAGGTCTACTAAACAAAGAGGACGGTAAAGAAGATCAAGGTGAAGAAGAAGATGAGTACCTTATGGCTGAAGCAAGACAACCATTATGGCGCAAAGTTCCAATACCATCAAGCCTAATCAATCCATACCGCATAGTAATTGTGATGAGACTAGTTATCCTAGCTTTCTTCTTCCGTTTCCGTATCTTAACACCAGCATATGATGCATACCCTTTATGGCTTATATCAGTTATCTGTGAGATATGGTTTGCACTGTCATGGATACTTGATCAGTTTCCAAAATGGTTCCCAATAACACGTGAAACTTACTTAGACCGTTTATCTATAAGATTTGAACGTGAAGGTGAACCAAACCAACTTGCAAATGTGGATGTTTTTGTCAGTACTGTTGACCCTTTGAAGGAGCCACCTATTATAACAGCAAACACTGTTCTGTCAATACTTTCTGTTGACTACCCTGTTGAGAAGGTTTCATGCTATGTGTCAGATGATGGTGCTTCTATGCTTTTGTTTGATTCTTTGGCTGAAACTTCTGAGTTTGCAAGAAGGTGGGTTCCTTTTTGCAAAAAGTATAGTATAGAGCCAAGGGCACCTGAGTATTATTTTTCTGAGAAGATTGATTACTTGAAGGATAAGGTGCAGCCTACATTTGTTAAGGAAAGAAGGGCTATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATGCTTTGGTAGCAAAGGCTCTGAAGAAACCCGAGGAAGGGTGGGTTATGCAGGATGGAACTCCATGGCCTGGGAACAACACTCGTGATCATCCAGGAATGATTCAGGTATACTTAGGAAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCAAAACTTGTGTATATTTCGCGTGAAAAACGTCCTGGTTATCCGCATCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATCTTGATTGTGATCACTACATTAACAATAGCAAGGCTATTAGAGAGGCCATGTGCTTCCTAATGGATCCTCAGCTAGGGAAGAAACTATGCTATGTCCAATTTCCTCAAAGATTTGATGGTATCGATCGCCACGATCGATATGCTAATCGCAACACTGTATTCTTTGATATCAATATGAAAGGGCTTGATGGAATTCAAGGTCCAGTATATGTCGGTACTGGAACTGTGTTCAACAGACAAGCATTATATGGCTATGATCCACCAGTTTCAGAGAAAAGGCCAAAGATGACATGTGATTGTTGGCCAAAATGGTGTTGCTTTTGCTGTGGTGGAAGGAAATCCAAGTCAAAAAAGAAGTCAGGAACAGCAGGAAGAGGAGGAATCTTTAGTAGATTGTACAAGAAGAAAAAAATGATGGGGAAAGATTATGTTAGAAAAGGATCAGGTTCCATGTTTGATCTTGAAGAGATTGAAGAAGGACTTGAAGGGTATGAGGAGCTAGAGAAATCATCACTCATGTCACAGAAAAACTTTGAAAAGCGGTTCGGACAGTCGCCGGTTTTCATTGCTTCCACTTTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATACACAATCATTGGTTAAGGAAGCCATTCATAACATAAGTTGTGGATATGAAGAGAAGACAGAATGGGGAAAAGAGATTGGATGGATTTATGGGTCAGTGACAGAAGATATCTTGACCGGATTTAAGATGCATTGTAGAGGATGGAAATCAGTATATTGTATGCCAAAGAGACCAGCTTTCAAGGGATCTGCACCAATCAATCTATCAGATAGGTTGCACCAAGTTCTTAGATGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGTCGCCATTGTCCATTGTGGTATGGTTATGGTGGAAAACTCAAGTATCTAGAGAGAATGGCTTATACTAATACCATTGTTTATCCATTCACTTCAATCCCTCTAATTGCATACTGCACAATTCCAGCTGTGTGTCTCCTTACTGGAAAATTCATCATTCCCACTTTGACCAACCTTGCTAGTGTTTGGTTTATGGCACTATTTATCTCCATCATTTTAACCGGTGTGCTCGAGCTTCGATGGAGTGGAGTCGCCATTGAAGACTGGTGGAGAAATGAGCAATTTTGGGTGATTGGAGGTGTTTCAGCACATCTTTTTGCAGTGTTTCAAGGTCTCCTTAAAGTTCTAGCTGGTGTAGACACAAACTTCACTGTCACAGCAAAAGCAGCAGATGATGCTGAATTTGGTGATTTGTATCTCTTCAAATGGACTACACTTCTCATTCCACCAACAACTCTTATAATCTTAAACATTGTTGGAGTTGTTGCTGGTGTCTCTGATGCAATTAACAATGGATATGGCTCTTGGGGACCTTTATTTGGGAAACTATTCTTTGCATTTTGGGTCATTGTTCATTTATATCCTTTCCTTAAAGGTCTCATGGGAAAACAAAACAGGACACCTACAATTGTTGTGTTATGGTCAATTCTTTTAGCATCAATTTTCTCATTGATTTGGGTTAGGATTGATCCTTTCTTGCCTAAACAAAATGGTCCTATACTCAAACAATGTGGAGTAGAATGCTAA 3075 0.3987 MASNTMAGLITGSNSHFSHDSDEHKAPTGRQSSLKTCRVCGDEIGYKENGELFVACHVCGFPVCKPCYEYERSEGNQCCPQCNTRYKRHKGCPRVVGDEEENLDGDDFEDEFPIKNHYDELDQHRDVNHLDLEGEKEFYSNAEWKERVEKWKVRQEKRGLLNKEDGKEDQGEEEDEYLMAEARQPLWRKVPIPSSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLANVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVSCYVSDDGASMLLFDSLAETSEFARRWVPFCKKYSIEPRAPEYYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGGRKSKSKKKSGTAGRGGIFSRLYKKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERMAYTNTIVYPFTSIPLIAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGDLYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQNGPILKQCGVEC 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01091 1024 SUPERFAMILY RING/U-box 23 104 - -
Car01g01091 1024 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 110 IPR013083 -
Car01g01091 1024 Pfam Cellulose synthase 280 1017 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car01g01091 1024 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 139 1024 - -
Car01g01091 1024 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 386 572 IPR029044 -
Car01g01091 1024 MobiDBLite consensus disorder prediction 1 16 - -
Car01g01091 1024 Coils Coil 378 398 - -
Car01g01091 1024 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 26 119 - -
Car01g01091 1024 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Car01g01091 1024 SUPERFAMILY Nucleotide-diphospho-sugar transferases 293 824 IPR029044 -
Car01g01091 1024 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 139 1024 - -
Car01g01091 1024 Pfam Zinc-binding RING-finger 31 102 IPR027934 -
Car01g01091 1024 MobiDBLite consensus disorder prediction 1 29 - -
Car01g01091 1024 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 26 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01091 Car-Chr1 10794460 10800560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01091 35 1024 Glycosyltransferase AT5G05170 65.511 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01091 K10999 - gmx:100781996 1889