Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01083 ATGACTTCCACTTTCGTTGTCTTATTCTTCTATCTCCTCTCAACTCCTTCATTTGCTTCTTTGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCTCTGGCAAGACTTCTTGAGCTTGGAATGGTTAGTGATGCTAATGACTATCTAGAGAGGACATTTTTAAGTCCTGCATCGATGAGGGCAATTCATCTTACTCAAAAATGGATGGAGGATGCTGGTTTGAGAACCTGGGTGGACCAAATGGGAAATGTACATGGTAGAGTTGATGGCGTAAATGCAAATACCGAAGCTTTATTGGTTGGATCTCACTTGGACACTGTTGTTGATGCTGGTAAATTTGATGGATCACTAGGAATAGTGTCTGCAATATCGGCTTTAAAGGTTATGCATGTCCATGGAAAGCTGCAAAAGCTAAGGCGCCCTGTTGAGGTGATTGCATTTTGTGAGGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGCAGTGGTGCTATAGCTGGTATTTTACCTGCTACAACATTGGAGATATCAGATAAAAGGAATGTAACGATAAAAGAGGTTCTTAAAGAGAACTCAATAGAAGCTACGGAGGAAAGTTTCTTGCAGCTCAAATATGATGCAAAATCTGTTTGGGGTTATGTTGAGCTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGACAGACACGGTTGAAGGTTACGGTTAGAGGCTCGCAAGGTCATGCCGGAACCGTTCCAATGTCAATGCGCCAAGATCCCATGGTGGCTGCTGCTGAACAAATTGTACTTATTGAAAGCCTCTGCAAACATCCTGAAGAATACCTTTCTTATGATGGTCATTGCAGCGATTCGTCAATAAAATCACTCTCAAGTTCACTTGTTTGCACGGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCCGGACAGGTTACATATACCGTGGATATACGAGCAATTGATGATCTTGGACGTGAGGCTGTTATCTATGATTTATCAAATCGAATTTATCAGATATGTGACAAACGCTCAGTTTCCTGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATCCTGAACTAAGTTCACAGCTGAAGTCTGCAGCTTATTCTGCACTCAAGAAAATGGAAGGTGACATTCAGGATGAAGTGCCAACATTAATGAGTGGAGCAGGACATGATGCCATGGCAATGTCTCGCTTAACAAAGGTGGGAATGTTGTTCGTGCGATGTCGCGGAGGCATAAGTCACTCTCCACAAGAGGACGTGCTAGACGACGATGTTTGGGCGGCCGGTTTAGCATTCTTATCATTTCTGGAAAATCTATAG 1422 0.4269 MTSTFVVLFFYLLSTPSFASLFSGIETGDLEKRGDLFPQILRDEALARLLELGMVSDANDYLERTFLSPASMRAIHLTQKWMEDAGLRTWVDQMGNVHGRVDGVNANTEALLVGSHLDTVVDAGKFDGSLGIVSAISALKVMHVHGKLQKLRRPVEVIAFCEEEGVRFQTTFLGSGAIAGILPATTLEISDKRNVTIKEVLKENSIEATEESFLQLKYDAKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMVAAAEQIVLIESLCKHPEEYLSYDGHCSDSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCLIEHKHDAGAVICDPELSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAMSRLTKVGMLFVRCRGGISHSPQEDVLDDDVWAAGLAFLSFLENL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01083 473 Pfam Peptidase family M20/M25/M40 112 470 IPR002933 GO:0016787
Car01g01083 473 SUPERFAMILY Bacterial exopeptidase dimerisation domain 252 384 IPR036264 -
Car01g01083 473 PANTHER ALLANTOATE DEIMINASE-RELATED 34 467 - -
Car01g01083 473 Gene3D - 252 384 - -
Car01g01083 473 Gene3D Zn peptidases 57 463 - -
Car01g01083 473 PANTHER ALLANTOATE DEIMINASE-RELATED 34 467 IPR010158 GO:0016813
Car01g01083 473 SUPERFAMILY Zn-dependent exopeptidases 37 473 - -
Car01g01083 473 CDD M20_bAS 46 471 - -
Car01g01083 473 Pfam Peptidase dimerisation domain 252 363 IPR011650 -
Car01g01083 473 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 46 297 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01083 Car-Chr1 10687788 10693007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01083 K02083 - gmx:100819399 810.061