Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01069 ATGAAATTGGTATTTACTCCATCCTCCACGGTCCAAGACGTGAAACTTATATACCTTTTGCGTATATTTTCTCGTCCTATAAACAAACCTCTTAGGTCGCTCGCTTCTCTCTCGTTCCAACGCGTCGCGAACATGCCACCAGCACGAGAGCTTCCAGGGTTCTATTTTGACACAGAGAAGAACCGGTATTTCCCAATCAAAGGCCCCATTCCCGGCTCTTCTTCTTCTAAGAACAAAACCACTATTCCAAAGCCTTCCCAAACCTCTTCCTCTCAGTTACAGGAAAGGAATAGGAGTTGTTGTAGGAAGCTTAGTAACAGAACATCTAAGCTGCTTCAGATTAGGGAGCTAGATGGTCGTCATGTCAATGCCTCACACTATTGCAAGTGTAACTTCACTGATGAATTCCGGAAAATACAAGCATCTCAACCTGCCGTTTGGAAGTATCAAGGAACTGATAGGTTAGGTATTAGTGCTTTGAAACACTTAAATGTTGATGTGCAGACAGTAGAGGGTAGATTTAGAACCGATGTTTTATTGACTGGCAGCATAAATGGCTCGCTGAGTTTTTCTGAAGTTGGAAGGATTGGGCAAAATTTTGATGACGGGGTAAAGTGGATGCCGGTTTGTGTGAAGAATCATATTAAAGGGAATACAGATGTGCCTAGCAAGGTGCCAGGTCCGCTTTTCAGACCAAATGGAGCTTCCCTGCTTATGTCCTCCAGAATATCTTGTTTAAGATTGGGTCCTAATTTATCTCCTCATGCTGTGAATGACAGTCCAATTGTTGGAAATGCATTATTTACTACACTGGGATCAGAAACATCAGGCGGATCTGTTTATACCCTCAGTCTTGTTGAGCCAATAGATCTTGGATCGGGAATACTGAACACATGGAGCAGACTAGAGGAAGTTGCTTCTTTCAAGGGTACCCTTTGGACAGCTGAATACGACTATACTAGACATCGGGCAATAGTTGGAACTAATATGGGAGGTGCTTCGGTGGATCTGGAAACTGGGACAAGGTCATGGTTTTTACGTTGTAAAAGTGATGTTTTTGCAGAACAGATTGTTGATTCAGGAAATGTGATTTTATGTGGACTCAGAAATGGGGCAGTTGTCTCCGTAGATTTTCGAGAGAAAAGATTGCATTCTGGTAGACTTCCTCAGCATAGGATATCTTATGTATCTTCAGATAAGAAAGTTGGAAGTTCTAATAAAGATTGGTTAAAGCTTTCCGGAAACATATATCCTTCACATACCATTAAGATGCCTTCATCTATATCCTGTTTGGCATCACTTCAGTTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGATCGATAAGGCTATACGACCGTCGCATACTCCAGAGGGGTGCTGTTCAATCTTATGAAGGGCACATGAATTCCCATACTCAAATACAACTCGGTGTTGATCCAGATGAGAGATATGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGTTATGGAGTATCAAGTCTGGCGAATTGCTTTTGGAGGATAAGTTCTCTAATACAGTTCTGTCCACTGTGTGCTATCAAACATTTAAAAAATTTAAAGCAGAGGAAGAAAATCAATACACACGTGACTCTTCTTTGGGTTTCTATGTAGATCATCTTGTTCGTGTAACTGTGAGATTCACGTTTCATCGTATACGGCCAGCCATGGTTGAACTGGAGACAACTGACGACTGTGTCATAACTGCATTAACATATTCAACAGCTCAGCATTATCCTGTCTTTGCTGAACAGATTGGTTGCGTAAATACAGTGGATTTCTGA 1809 0.4185 MKLVFTPSSTVQDVKLIYLLRIFSRPINKPLRSLASLSFQRVANMPPARELPGFYFDTEKNRYFPIKGPIPGSSSSKNKTTIPKPSQTSSSQLQERNRSCCRKLSNRTSKLLQIRELDGRHVNASHYCKCNFTDEFRKIQASQPAVWKYQGTDRLGISALKHLNVDVQTVEGRFRTDVLLTGSINGSLSFSEVGRIGQNFDDGVKWMPVCVKNHIKGNTDVPSKVPGPLFRPNGASLLMSSRISCLRLGPNLSPHAVNDSPIVGNALFTTLGSETSGGSVYTLSLVEPIDLGSGILNTWSRLEEVASFKGTLWTAEYDYTRHRAIVGTNMGGASVDLETGTRSWFLRCKSDVFAEQIVDSGNVILCGLRNGAVVSVDFREKRLHSGRLPQHRISYVSSDKKVGSSNKDWLKLSGNIYPSHTIKMPSSISCLASLQFDDQYFLASSMDGSIRLYDRRILQRGAVQSYEGHMNSHTQIQLGVDPDERYVMSGGEDCKLRLWSIKSGELLLEDKFSNTVLSTVCYQTFKKFKAEEENQYTRDSSLGFYVDHLVRVTVRFTFHRIRPAMVELETTDDCVITALTYSTAQHYPVFAEQIGCVNTVDF 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01069 602 ProSiteProfiles Trp-Asp (WD) repeats profile. 478 509 IPR001680 GO:0005515
Car01g01069 602 Gene3D - 299 601 IPR015943 GO:0005515
Car01g01069 602 MobiDBLite consensus disorder prediction 67 99 - -
Car01g01069 602 Pfam WD domain, G-beta repeat 419 454 IPR001680 GO:0005515
Car01g01069 602 Pfam WD domain, G-beta repeat 463 500 IPR001680 GO:0005515
Car01g01069 602 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 56 535 - -
Car01g01069 602 PANTHER KATANIN P80 SUBUNIT 56 535 - -
Car01g01069 602 SUPERFAMILY WD40 repeat-like 301 514 IPR036322 GO:0005515
Car01g01069 602 MobiDBLite consensus disorder prediction 71 99 - -
Car01g01069 602 SMART WD40_4 459 500 IPR001680 GO:0005515
Car01g01069 602 SMART WD40_4 415 454 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01069 439 511 Miscellaneous Gene Families AT5G08390 31.507 1.13e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01069 K11799 - gmx:100798753 727.243