Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01064 ATGCCTTCTCAATCTCATAATTGCATTTTACTTCCCCAAATTACCCTCACATTTATGCTATATTTACTAATCTTATCCCCAACACCATCCCTCTCCCTCAACATCACCGCTCTCCTCTCAACCTTCCCCGACTTATCCCAATTCACCGCCCTCCTCTCCGCCGCAACTCCCCTCACCACCGAACTCTCCCACCGCACTTCCCTCTCTCTCCTCGCCGTCCCAAACTCCTTCCTCTCTACCGACCCTCACCTCTCCCACCACCAACTTTCCTCCTCCGCCCTCACCGACGTCCTCCGCTACCACGTTCTCCTCCAATTTCTCTCATGGTCCGACCTCCACTCCCTCCCTCCCTCCGGAAAACTCGTCACCACTCTCTTCCAAACTACCGGCCGCGCTACAAACAATTTCGGCTCCGTTAACATCACACACGACCCTCATACCGACGCCGTTTCGATCCGTTCACCTGCACCTTATTCTTCTTCAAACGCAACCGTTATCGAACTTATCAAAACCCTACCTTACAACGTTACAATCTTCACCGTTAGTTCTCTCTTAATCCCTTATGGTTTTGATCTCATGGCATCGGAAACTCGTCCTAGCATACTTCTAAACATTACTAAAACTTTAATCGAAGCTCATAATTTCAATGTCGCTGCTTCAATGCTTTCTGCTTCCGGCGTCGTTAATGAATTCGAAGCCGGTGAAGGCGGCGCCGGAATCACGATGTTTATTCCCGTCGATGACGCTTTCGCCGATCTACCTCCCTCCGTTTCGTTACAATCACTTCCGGCGGATAAAAAAGCCGTTGTTCTCAAAAACCACGTTCTCCGTGCTTATTACCCTCTTGGTTCACTTCAATCCACTTCGAATCCATTGCAGCCTACACTCGCCACTGAAACCATGGGCGCCGGAAGCTTCACGCTCAACATTTCTAGGTTTAACGGCTCCGTCGCGATTAATACCGGCATTGTTCAAGCTTTAATTACTCAGACGGTGTTTGATCAGAATCCTATAGCGATTTTCGGCGTTTCTAAGGTTTTGTTACCAAAAGAGATTTTTGGAAAGAATCCAATTGTGTCTGCGAAATCGCCTCCGGAAAGTGGTGCTCCTCCTTCGTATGATGACACTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAATTCACCGGGGATTGA 1197 0.4695 MPSQSHNCILLPQITLTFMLYLLILSPTPSLSLNITALLSTFPDLSQFTALLSAATPLTTELSHRTSLSLLAVPNSFLSTDPHLSHHQLSSSALTDVLRYHVLLQFLSWSDLHSLPPSGKLVTTLFQTTGRATNNFGSVNITHDPHTDAVSIRSPAPYSSSNATVIELIKTLPYNVTIFTVSSLLIPYGFDLMASETRPSILLNITKTLIEAHNFNVAASMLSASGVVNEFEAGEGGAGITMFIPVDDAFADLPPSVSLQSLPADKKAVVLKNHVLRAYYPLGSLQSTSNPLQPTLATETMGAGSFTLNISRFNGSVAINTGIVQALITQTVFDQNPIAIFGVSKVLLPKEIFGKNPIVSAKSPPESGAPPSYDDTLXXXXXXXXXXXXXXXGEFTGD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01064 398 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 371 IPR033254 -
Car01g01064 398 Pfam Fasciclin domain 214 349 IPR000782 -
Car01g01064 398 ProSiteProfiles FAS1/BIgH3 domain profile. 32 185 IPR000782 -
Car01g01064 398 ProSiteProfiles FAS1/BIgH3 domain profile. 202 347 IPR000782 -
Car01g01064 398 Gene3D FAS1 domain 26 187 IPR036378 -
Car01g01064 398 Gene3D FAS1 domain 194 350 IPR036378 -
Car01g01064 398 SUPERFAMILY FAS1 domain 31 188 IPR036378 -
Car01g01064 398 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 13 371 - -
Car01g01064 398 SUPERFAMILY FAS1 domain 209 350 IPR036378 -
Car01g01064 398 SMART fasc_3 241 350 IPR000782 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01064 - - ccaj:109812902 533.487