Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01052 ATGGCTCCTGTACCAATTTCTACCTTAAACGTAGGACACATTGATGATGTACAAGAATTAAGAAGAACTAAGCCTAAGACAATTCCTCAAAGATTTGTAAGAAACATGACAGAAAGACCAACACTTCAAACACCTCTTTCCCCACCAAATAGTGACATGCCTGTCATTGATTTCTCTAAGCTTAGTAAAGGGACCAAAGAAGAAATCCTCAATGAACTTTATAAGCTTGCAACTGCTTGTGAAGAGTGGGGATTTTTTCAGGTGATTAATCATGAGATTGACCTCAATCTGATGGAGAACTTAGAGGATTTGAGCAGGGAGTTTTTTATGCTACCTTTGGAAGAGAAACAGAAATACCCTATGGCTCCAGGCACAGTCCAAGGGTATGGACAAGCTTTTGTTTTCTCAGAGGATCAGAAGCTTGACTGGTGCAACATGTTTGCTCTAGGAATTGAACCTCACTATGTAAGGAACCAAAATCTTTGGCCAAAGAAGCCTGCAAGACTCAGTGAAACAGTGGAATTGTACTCAAGAGAAATAAGGAAACTATGTCAAAATTTGCTGAAATACATAGCAATAGGGCTGAGTTTGGAAGAAGATGTGTTTGAGAAGATGTTTGATGAAGCAGTACAAGCCATAAGGATGAATTATTATCCACCATGTTCAAGACCTGACCTTGTTTTGGGTCTGAGTCCTCATTCAGATGGAAGTGCTCTCACTGTGCTGCAACAAGCAAAGGGAAGTCCAGTGGGACTTCAAATACTCAAAAACAACACATGGGTCCCTCTTCAACCAATTCCAAATGCTCTTGTCATCAACATTGGTGACACAATAGAAGTTCTTACAAATGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTAATGAGGATAAAGATAGACTCTCAATTGTGACATTTTATGCTCCTAGCTATGAAATTGAGGTTGGACCAATGGATGAATTTGTTGATGAAAAGCACCCATGCAAGTTTAGAAGATACAATCATGGAGAGTATAGTAAACACTACGTAACAAATAAGTTACAAGGAAAGAGGGCCCTGGACTTTGCCAAGATGGAAATCATGAATAATACAAACTAG 1101 0.3942 MAPVPISTLNVGHIDDVQELRRTKPKTIPQRFVRNMTERPTLQTPLSPPNSDMPVIDFSKLSKGTKEEILNELYKLATACEEWGFFQVINHEIDLNLMENLEDLSREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPHYVRNQNLWPKKPARLSETVELYSREIRKLCQNLLKYIAIGLSLEEDVFEKMFDEAVQAIRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGSPVGLQILKNNTWVPLQPIPNALVINIGDTIEVLTNGKYKSVEHRAVANEDKDRLSIVTFYAPSYEIEVGPMDEFVDEKHPCKFRRYNHGEYSKHYVTNKLQGKRALDFAKMEIMNNTN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01052 366 Gene3D - 12 351 IPR027443 -
Car01g01052 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 310 IPR005123 -
Car01g01052 366 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 361 - -
Car01g01052 366 PANTHER PROTEIN SRG1 10 361 - -
Car01g01052 366 SUPERFAMILY Clavaminate synthase-like 16 351 - -
Car01g01052 366 Pfam 2OG-Fe(II) oxygenase superfamily 211 310 IPR044861 -
Car01g01052 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 164 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01052 Car-Chr1 10140498 10143078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01052 52 354 Glycosyltransferase AT5G59530 35.220 1.83e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01052 - - gmx:100785152 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01052 01 10140498 10143078 Car01g01052 01 10140498 10143078 ECH