Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01028 ATGGTTATGCCATATACAGCTATACAATTTACTGTTTTACACAAGTTTAAGACTATTGCCTCTGGTTCATCCAAGACAGAGAATCACATTAATCTGAGCCCTTATCTATCCTATATAAGCGGGGCGGTAGCTGGGTGTGCAGCTACCGTAGGGTCGTATCCCTTTGATCTTCTCCGAACTATATTAGCTTCTCAGGGTGAACCAAAGGTTTATCCAAACATGAGGTCAGCATTCATTGATATTCTCCGGAATCGTGGGTTTCAAGGCTTGTATTCTGGACTTTCACCGACACTAGTTGAGATTGTACCTTATGCAGGCCTACAATTTGGCACTTATGATACATTTAAACGTTGGGCCATGGCGTGGAACCATGTTCAATCTTCAACAAATACTGCTGCAGAAGAGAGCCTCTCTAGCTTTCAGCTTTTCCTATGTGGGCTGGCAGCAGGAACATGTGCCAAGCTTGTCTGTCATCCACTTGATGTGGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGGGTTGAACATCGTGCATATAGAAATATGTTTGACGGCTTGAGACGGATATTACAGATGGAGGGATGGGCTGGTCTGTATAAGGGGATAGTTCCATCTACTGTTAAAGCTGCACCAGCTGGTGCTGTAACTTTTGTTGCATATGAATTGACATCAGATTGGCTGGAGTCTATATTAACTTGA 723 0.4329 MVMPYTAIQFTVLHKFKTIASGSSKTENHINLSPYLSYISGAVAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFIDILRNRGFQGLYSGLSPTLVEIVPYAGLQFGTYDTFKRWAMAWNHVQSSTNTAAEESLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDGLRRILQMEGWAGLYKGIVPSTVKAAPAGAVTFVAYELTSDWLESILT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01028 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 234 IPR018108 -
Car01g01028 240 PANTHER SOLUTE CARRIER FAMILY 25 1 239 - -
Car01g01028 240 Pfam Mitochondrial carrier protein 137 235 IPR018108 -
Car01g01028 240 Pfam Mitochondrial carrier protein 33 119 IPR018108 -
Car01g01028 240 PRINTS Mitochondrial carrier protein signature 146 168 IPR002067 GO:0055085
Car01g01028 240 PRINTS Mitochondrial carrier protein signature 47 65 IPR002067 GO:0055085
Car01g01028 240 PRINTS Mitochondrial carrier protein signature 91 109 IPR002067 GO:0055085
Car01g01028 240 Gene3D Mitochondrial carrier domain 1 237 IPR023395 -
Car01g01028 240 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 239 - -
Car01g01028 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 118 IPR018108 -
Car01g01028 240 SUPERFAMILY Mitochondrial carrier 2 229 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01028 Car-Chr1 9842017 9848532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01028 1 240 Organic Solute Cotransporters AT3G21390 77.366 4.76e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01028 K15108 - gmx:100784986 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01028 01 9842017 9848532 Car01g01028 01 9842017 9848532 ECH
Car07g00581 07 5071556 5075342 Car01g01028 01 9842017 9848532 PCT