Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01020 ATGGATGCAAAACCTTCTTCAGAACCTTTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGAAGGAAAGTAAAGAAAGTTCTGAAGAGCATTGATGGTGTTTTCACTGCAACAATCGATTCACAACAGCAAAAAGTAACAGTAACTGGAAATGTTGGTGTTGAGACCCTTTTAAGGAAGCTGGTCAGAGCCGGAAAACACGCCGAGAACAAAAATTCAAAAACCGGCACCGGAGAGTTGCCGGTAAAGTCGCCGGCCGGTGACCATGTTCCTCCGGTGACAGGCCGGAGTGATGGTTGTGGAGGGGGGTCTGATAAGAAGAAGAAAAAGAAAGATGGTGGGATTGGAAGCAATGGCTTGAGTACTACAGTAGCTAAGAGTGGACCAGCACACACTGGATTGCAATTTCAGAATCTTGGTCAAATGAATCTCAGCCCTACACGTCAGCAATCATTGTTGTACCCACCAGAAACTTGTTACCCTCCGGCTCCAATGGTTTATGTGTCAGCTTACAATAGAGGATATCCTATGGGAAGAGTTGGTGATCTTTCTTATTTTGTTCCACCTTCACCCTACACGTGTCATGGCCTAGATCAACATGCTACTTATCAATTTCAATCAGGACCGTTTGTTTCTTTTGAGATTTTTAGTGATGAAAATGCTAATGGATGTTCCATTATGTGA 702 0.4345 MDAKPSSEPLKYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDSQQQKVTVTGNVGVETLLRKLVRAGKHAENKNSKTGTGELPVKSPAGDHVPPVTGRSDGCGGGSDKKKKKKDGGIGSNGLSTTVAKSGPAHTGLQFQNLGQMNLSPTRQQSLLYPPETCYPPAPMVYVSAYNRGYPMGRVGDLSYFVPPSPYTCHGLDQHATYQFQSGPFVSFEIFSDENANGCSIM 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01020 233 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Car01g01020 233 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 78 233 - -
Car01g01020 233 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 3 75 - -
Car01g01020 233 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 3 75 - -
Car01g01020 233 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 78 233 - -
Car01g01020 233 MobiDBLite consensus disorder prediction 71 129 - -
Car01g01020 233 CDD HMA 17 75 IPR006121 GO:0046872
Car01g01020 233 Pfam Heavy-metal-associated domain 19 70 IPR006121 GO:0046872
Car01g01020 233 Gene3D - 11 74 - -
Car01g01020 233 SUPERFAMILY HMA, heavy metal-associated domain 11 75 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01020 Car-Chr1 9667949 9669361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01020 - - mtr:MTR_2g436830 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01020 01 9667949 9669361 Car01g01020 01 9667949 9669361 ECH
Car07g00576 07 5005803 5007228 Car01g01020 01 9667949 9669361 PCT