Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01008 ATGGACGAAACCATATCCCGCATAGTGACAGAACTCGAAGACCTCCGCGAAAACCACCACCCACAAAACCCACAACCACTCTCCCAACAATCGCTCTCAGATCTTCAAACCCTCCTCAAAACCTCACAACCCTTAAACCCTCTCTACGACGCCGTTTCACCTTCAAATCTCATCCCACCAATCGCCACCGCAATGGACTCATCGCCAACTTCTCACTCTCTCCTCGCTTCTCACGTCTTCCTCTCCTTCCTCCTCTCTCCAAACGCTCCCGTTTTCACTCTCTTCACTCCTCTATCCTTCCTCTCATTTCTCCGTTCCATTCGCCGTTCATTCAAAAATAATAACCCTAACAATAACCCTAACCACATTCGTAAACGAAAACGCAAAAAAAATCAACAAAACGACGACGCTGAACCTAATTCCCCAAATTCTTCACAAAAATTTGATGTTAGGGTTTTGCTTCAACTTTTCGAGAAGCTTGTTAACGTTATGTCATTAATTCACCTCGATCGTTTCCCCGAATCTCTCAAATCGTTAATTCAAACCGTTTCCGAGATTCCGTTAACAGCTATTGAATCATGTGGAAACGAGATTCAGTATAGGAATTTGGTTACTCTATGCTCGAGGGTTTTGAAAGAGGTTTTGAAACCGGAGCACGGCGAACCTTCGGAAACGGCTGCGGAGGTTTTGAAGTCACTGTCTCCGCTTGTTTTCATGCCGAAATCGCAGGCGAGGAgttttgctgttggttttgtgattggtcttggtAGGGATTGTGATGGTGTGAAGAAAGCTTTGGTTAATTTTCCGAGGTATTTGGCGAATAAGGCGCCAGATAAAGCTGAGCCTAGAGCTTTGGCTGTTGATTTTATAATGGAGGTTGTTAGGGTTATGGAATTGGTGGATCAAATTGGGTTTGTTAAGTATGTTGTGAAGATGAGTCAAGGGAAAACTAATCTTAGGCTTTTGGCGGTTGATCTTATTTTGAATTTGGTGACGACATTGAAGGACCCATTAGTTTTGAATGTCAATTCGATGGAGGAGGAAGAAGAAGGGAGTGAGGTTTGGGGAATGTGGTGTTTGGAGGCGTTGGTGAAGCGTTGTTCGGATGTTAGTGCCACGATTCGAGCGCGGGCTTTGTCGAATTTGGCGCAGGTTGTTGGGTTTTTGTCAGGTAGTGATAAGGCTAGTGTGGTTTTGAAAGAGTTTATGGGTTTTGGTGATGGGAATGGGAATGTTGGGGCTGTGAGAGGAAATGGAATCAATGAGATGTTGAGACGAAGGTGTGTGGATGAGAAGGCGGTTGTGAGAAAAGCTGCTCTTCTCCTTGTTACTAATTTGACTGCTTTACTTGGTGGTGCTATTGATGAAGTGGTGCTCAAGACAATGGGGATGGCTTGTTCGGATTCGCTTGTTAGCATACGGAAAGCCGCTGTTGCAGCTCTTTCTGAGGCTTTCAGAACATTCTCATCTGAAACGGTAATAACTGAGTGGCTACATTCAGTTCCTCGCCAAATAGCTGATAACGAATCCAGCATCCAAGAAGAATGTGAGAATGTGTTTCAAGAACTTGTTTTGGACCGAATATCTAGAGCTGCAGCTGCTACCTCTTCATATAGTGAATCTACATCTAGTGGAAAAAAGAAACAAAAATGTTTGGAGAAAGAGATGGAGATGCCTTTCCCCCAAGGAATTATGTATCTCCTGAGAGAGATTTGCAATGGGGAGGTGAGTCCTTGGGTGAAAAAAATTTGCACAAACCTAGGCAAAAAGAAACGGTTGAATCACAAAATTGTTGCTGCACTTCAAAATATAATCAAGGCGTCTGAGTCTGTCTGGTTGAACCATAGCAAGCCAATAGAAAAGTGGACTGCCCCACCAGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTCCTTCCCAAAGCGGTGGACTGGGATTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATAAAGTGAAAGGTGAGTTTAGAAGTCCAATTGTACAAAGAAATGCTTTTGAAGACGAAGAAAGCATTGAATACAATAATGTAGCCTGGGCTAGTGACCGAGTTTTTCTCTTGCAAACTATCTCTAATGTTTCTGTGGAGCTGCCACCTGAACCTGCTGCTGATTTGGCTCATAACTTACTCAAACGAGTTGAAAAATTCAACATGCATTCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAGCGAAAAGCTTCAAATGAGACGGAGGCAGAAGCATTAGTCTTGAAATGGGTACACCAAGTTCTGTCCAAAGCTTCTGAAATAATAGAAACTTTTATTTCAGATAACTCAGAGCAAAATCCAGAAACTGACTTCTTCACTCCACCTAGAAGTGGGACTAGTAAAAGTAGGAAATCAGTTAAAAAGCGCAAGTCATTGTCAAAAGCAATTACAGCAGTTTATACAATTGGGTCTTTAGTTATTGTCTGCTCATCTGCTGATATGAGTGCGGTAGTTCCATTATTGCACACTATCGTCACCTCTGGGAATTCTGGCCCGAAATTAAATAAACTACCCGGAGCTGCAACCTCTCTACAACAAGAAGCTCCTTCTTTTTATATTCATGGGTGGTTGGCCATGGGCAAACTTTGCCTTGCTGATGGGAAGCTCGCAAAGAACTATATTCCTCTATTTGTACAGGAGCTTGAAAAGACAGAATATGCAGCTCTTCGAAATAATATTGTGGTCATGATGGCAGACTTTTGTGTTCGGTACACTGCTCTTATTGATGGTTACATAACCAAGATCACAAGGTGTCTCTTAGATCCCTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCAAGACTGTTGCAGAGGGACTATGTGAAGTGGAGAGGTGTGCTATTTCTTCGTTTCCTTCTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGTTAGCAGATTTTCTCTTTGGAAACATTTTGAAAGTCAAGGCTCCTCTTCTAGCATATAACAGTTTTGTTGAGGCTGTTTATGTTTTGAATGACTGCCATGCTCATAATGGACACCGTGAGTCCCAAGAATCACGAACAGAAAGCCAACTTTTTTCCATCAGGGGTTCTGATGAAAAATCAAGGTCTAGAAGAATGCACATTTATGTTTCTCTACTAAAGCAAATGGCTCCTGAGCATCTTCTAGCAACCTTTGCCAAATTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTCAATTTAGAAGATGCAACTGGACAGTCCGTTCTACAGGATGCTTTTCAAATTCTTGGCTGTAAAGAGATACGCATTCAATCTACTCGTGTATCATCTGAATCGGCAGATTTAGAAGAAGAAGGGGGAGATGGATCTGCAGCTAGAGGAAAGGCTATAACTCAGGCAGTCAAGAAAGGCCTTATTCAAAACACTATACCCATTTTCATAGAGTTGAAACGTCTTTTAGAAACCAAGAACAGTCCTCTCATAGGCTCTCTCATGGAATGCCTCCGGGTCCTTCTCAAGGACTACAAGAATGAAATTGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATCTATGACATGCAGAAATATGAAGCGGCAAAAGCTAAAGCAACAGTTGCCGAGGCTGTAGCCTCCATGCCAAAATCAGGTGCAAATCAATCACCTGATGTTTCTACGAATTCGGCTAAGGAACAAGGACAAACACATGGACAAAATGAGGATAGCGACAAATTTCCAAGTGGTTCAAAAATTGCTTCAGCAATGGCAGATGCTGCAGCTGCAGCAAAGGCTCGTTCTGTGCTCAGGGATATTAACACGGGGGCAGCAACACCACCGCTTAGTTCTTTGAAAGTTCCGAAAGTCAAGTCTGTTACTGGTGGATGCATATCTAAAGTTGATAAGCGCTTGGATGTCTTAAAATCTTTGCGGAAAAAACATTCTTTCGATTCTGATGAAGAAAATTAA 3990 0.4203 MDETISRIVTELEDLRENHHPQNPQPLSQQSLSDLQTLLKTSQPLNPLYDAVSPSNLIPPIATAMDSSPTSHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNNNPNNNPNHIRKRKRKKNQQNDDAEPNSPNSSQKFDVRVLLQLFEKLVNVMSLIHLDRFPESLKSLIQTVSEIPLTAIESCGNEIQYRNLVTLCSRVLKEVLKPEHGEPSETAAEVLKSLSPLVFMPKSQARSFAVGFVIGLGRDCDGVKKALVNFPRYLANKAPDKAEPRALAVDFIMEVVRVMELVDQIGFVKYVVKMSQGKTNLRLLAVDLILNLVTTLKDPLVLNVNSMEEEEEGSEVWGMWCLEALVKRCSDVSATIRARALSNLAQVVGFLSGSDKASVVLKEFMGFGDGNGNVGAVRGNGINEMLRRRCVDEKAVVRKAALLLVTNLTALLGGAIDEVVLKTMGMACSDSLVSIRKAAVAALSEAFRTFSSETVITEWLHSVPRQIADNESSIQEECENVFQELVLDRISRAAAATSSYSESTSSGKKKQKCLEKEMEMPFPQGIMYLLREICNGEVSPWVKKICTNLGKKKRLNHKIVAALQNIIKASESVWLNHSKPIEKWTAPPGAWFLLSEVSVFLPKAVDWDFLHHHWQLLDKHKVKGEFRSPIVQRNAFEDEESIEYNNVAWASDRVFLLQTISNVSVELPPEPAADLAHNLLKRVEKFNMHSTEVDAHVKALKTLCKRKASNETEAEALVLKWVHQVLSKASEIIETFISDNSEQNPETDFFTPPRSGTSKSRKSVKKRKSLSKAITAVYTIGSLVIVCSSADMSAVVPLLHTIVTSGNSGPKLNKLPGAATSLQQEAPSFYIHGWLAMGKLCLADGKLAKNYIPLFVQELEKTEYAALRNNIVVMMADFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAVYVLNDCHAHNGHRESQESRTESQLFSIRGSDEKSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNLEDATGQSVLQDAFQILGCKEIRIQSTRVSSESADLEEEGGDGSAARGKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAVASMPKSGANQSPDVSTNSAKEQGQTHGQNEDSDKFPSGSKIASAMADAAAAAKARSVLRDINTGAATPPLSSLKVPKVKSVTGGCISKVDKRLDVLKSLRKKHSFDSDEEN 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01008 1329 Gene3D - 313 533 IPR011989 -
Car01g01008 1329 Coils Coil 1177 1197 - -
Car01g01008 1329 MobiDBLite consensus disorder prediction 1221 1256 - -
Car01g01008 1329 PANTHER CONDENSIN 3 1317 IPR026971 GO:0007076
Car01g01008 1329 SUPERFAMILY ARM repeat 310 1182 IPR016024 -
Car01g01008 1329 MobiDBLite consensus disorder prediction 783 803 - -
Car01g01008 1329 MobiDBLite consensus disorder prediction 1222 1254 - -
Car01g01008 1329 SUPERFAMILY ARM repeat 36 459 IPR016024 -
Car01g01008 1329 MobiDBLite consensus disorder prediction 783 797 - -
Car01g01008 1329 MobiDBLite consensus disorder prediction 111 144 - -
Car01g01008 1329 Pfam non-SMC mitotic condensation complex subunit 1 906 1083 IPR032682 -
Car01g01008 1329 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 3 1317 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01008 K11491 - gmx:100781242 1893.24