Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01006 ATGTTAGACCTCAAACATATATGGGTGCTTATTTCAATCAATAACTACATTCTCAACACAATAGTACAAGACAAAAAAACAAGAAACACTCTAAAAACAAGATGTAGCTCAAAGTTAAGCATTCAAAAGCAAGAATTCTTTGAATTCTCTCACCAATCAGTCCTATCCAATCTCTATTGGGGAATTGACAACATTGAAACAGCAATACAATCACAAAATCAAGAAGAAAGATCTATTAGGCTAACAAATTCAGAACAAATGCTTCAAGTTCCAGCAATGCTTGATGAAGATGAATTCACAGCTACAATTCCAAATCATTACTTAATTTGTTGCTCTTACTTTTACTTATCAGTGATTAGGAAACTTCAAGGTGATGAATGGCAAGCTGCACTTCATTTTCTTCAAGCTGTTTTGGTCTCTCCAAAACTTGTTTGGATAGAATTTGCACCACAACTTTGTGAAACTCTTTTTACTCAATCAAATTCAATCATCTATAATAAGTGTGAAAATAGTGGAAGTACTAGAAATTTTGAATCTGTTTTTTGTGGAAGTTCTGAGGAAGATATCAATGAAGAAACTGTTAAGGAGATGGCTAGGAGATACAAAGAATGTTTGGTGTATTATCAAGTCATGCTTTATGGAGAGACTCCATGGTGGAGCAGCAAAGAATCAACAAGTTATATGGACGTATCAAATACAAGCTGTGTATCTTCTACTTCAGTTCAACATGAATCAAGATTGAAAACTTGCAATACATATGAGAAGGTTCACCCTATTGATCCTCAAGATGTGATGGATAAAATGGAACAAGAGTCAAAACAATTCATTGATATTGCTGAATATGAAGGCAACAAGAAATCCCTCAAACAATTGAAGTCAGTTGAGTGTCACAAGAAAGAGCTCAAAACAATTGGCATCAAAGGCCTAAAGAAAAATATAGATGAGAGAAAATTTCATATAAGAACCACAATAACAAAAGCAGATGATCTACAACCAGAAACAAATGACAGGAATCTACATCAAATTTCTGGTTTACAGCAGACTCTTCAGCCTCCAATGCAGGAAAATTTGGATGCAAAAAACATAATTAATCTTGATTCTAGCATATTCACAAGGTCCATAGAAGATGTTGCTTTATCAATCTCCAAAAGGATAGAAAAAACAAACATCCATTTAAATTGTCATATAGATGATTTATTAATTGAAGAAGCATTGCAGCCACTAGAATTCCATCTCTTTGATCATCATGGAAGCAAACATCAACTCGGCCGCAAAAATCATGAAGAAAGTCCTAATATGAAGTTGCAAACATCATATAGCTTAGGAAATTTCAATGAAGTTTGTTCAACCTCAAGAAGATCTGAATGGAGAGAATCAGAACTAAAACATCCATATGGATTAGAAAAATGTGGTGAAGAATATATTATAGACACTGCATCCAATATTTTTGAGAGTTTGATTGGTTCATCAGAAACTACTTATGGTTCCTTAAAGGATGTGATTTTGGATGAACTGTTAATAATCATCTCAACTTCCAAAGAGGAAAGAGAACTAAGAGCATCAGTTTCTATTCTATCAACAATAATTTCAAGAAACAAATCAATCATAGAAGATGTGAAGAAAAAAGGTTTAAGGTTATGTGATCTAGCAAGTGCTCTAAAACAAAATGTTCATGAGGCAGCAATTCTGATCTATTTAATATATCCATCACCTATAGACATAAAAACATTGGAACTTCTTCCAATATTAGTAGAGATTGTATGCAATTCACAAAGTTATTACAAGACTAAGAAGCCAGAGTCGCTTCTTCTGACGCCTCATGCAGCATCATTGATGATCATTGAAGAAATTGTGACTTCATTTGATTATGCTACAAATAAAATGCATTTGGAAGCTATTAGTTCACCTCATGTTCTTTGTGGACTTATAGAAGTTGCTAAAAATAATAATCTTGAAGAGTTTTTCTCTTTGACTACAATTCTTATAAAATGTATGCAGTTTGATTCACAGTGCAGAAAGTACGTTTCACAGTTTACTCCTCTTGCTCCATTTCTACACCTTCTGCAGACCGATAATATCCGCGCCAAATGCATGGCGCTCGATTTTTTTCATGAAATCCTATGCATACCGCGATCATCTGCTATTAATCTGCTGCAGAGGATAAAGAAAGAATGCAGAATCAATATTATGCAGATACTAATGCATTGTGCCAATCAATTACAACCTTATCACCAGATTTTAGCTGCTAACATATTGATTCAGTTAGACACATTGAACCCATCTGATAAAAGCATGTTCAGAGAAGAAGCTGTGCAGATTCTCCTGAGGGCATTGACATATGAAGAAAGCTCAGAACAGATATTATCTGCATCCATTCTATCAAATCTTGCTGGAACATATGCTTGGACAGGAGAGCCATATACAGCTGCATGGCTTCTGAGAAAGACAGGCTTGACCTCTCCTTATCACCAAAATATGATAAGAAACTTCAACTGGTTGGATCAAAGTCTACAGGATACCAGCATAGATGTATGGTGCAGCAAAATTGCCAAATGTATCATAAGTGTTGGAGATTCCATCTTCTATACTTTAGAGAGGGGACTAAGAAGCAAGATGAAAAAGGTTTCTAGAGACTGTCTTGTAGCCATTTCATGGCTTGGATGTCAAATATCAAAAAGTCCAAACAGCCTCAGTAATTCTGCATCTGAGATTATACTAAGAGGAATTGAGCAATTTCTATATCCTGGAATGGAATTGGAAGAAAGACTTTTGGCATGTATGTGCATGTTTAATTATGCCTCAGGAAAAGGAAAGCAAAAACTAATGCAATTCTCAGAAGGAGTAAAAGAATCATTAAGACGCCTTTCAAACATAACTTGGATGGCTGAGGAATTACATAGGGTAGCTGATTTCTTGCTTCGAAACACATCACGTATTTCTTGTGTTCACACTCAAATCCTTGAGGCAGGTCACAACAACTTAAGCATATCAGTTTGCTCCCTTATATACTACAAGGGACTCTTATTCAGTGGATATTCAGATGGATCAATTAAGGTTTGGGATATTAGGGGACACTCAGCTAGTCTTGTATGGGACATTAAAGAGCACAAGAAGTCTGTGACATGCTTTTCAATTTATGGACCATTAGACAGCCTTTTAAGTGGATCAACTGATAAAACCATAAGGGTGTGGAAAATGATTCAAAGAAAGCTTGAATGTCTTGAAGTAATAGTCATGAAGGAACCAATTCATCATTTACGCGCACATGGTGAGACAATTTTTGCAATTACTGAGAAACAAGGAATAAAGCTTGTTAACAATTCAAGAGAGATAAGTGATATTTTCAAGGGTAAGCATGGAAAATGCATGACAGTGGCTCAGGGAAAGTTATATATTGGCTGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACAGAGAACAAGAAATCAAACCACCTACAAGAAGTTGGAGGAAGCAAAGTAAGCCCATCAATTCAATTGTAGCCTATAGAGATTGGCTGTATAGTGCAACAAGTAAGCATGTTGAAGGAACAACATTCAAGGAATGGAAAAGAAGTGGGAAACCCAAAAATTCAATCCTTAGTGACAAAGGAGATAATGTGGCAGCCATGGAAGTGGTAGAAGACTTCTTATACCTAATCTCCACCTCATCACCAAGCAGCATTCAGATTTGGTTGAGAGGAGTACCAAAAAAATTGGGGAGAATATCAGCAGGGAGCAAGATAACAAGCATCTATGCTGCCAATGACATTATTTTTTGTGGTACTGAAAAGGGACTAATCAAGGGTTGGATCCCTCTGTAG 3831 0.3581 MLDLKHIWVLISINNYILNTIVQDKKTRNTLKTRCSSKLSIQKQEFFEFSHQSVLSNLYWGIDNIETAIQSQNQEERSIRLTNSEQMLQVPAMLDEDEFTATIPNHYLICCSYFYLSVIRKLQGDEWQAALHFLQAVLVSPKLVWIEFAPQLCETLFTQSNSIIYNKCENSGSTRNFESVFCGSSEEDINEETVKEMARRYKECLVYYQVMLYGETPWWSSKESTSYMDVSNTSCVSSTSVQHESRLKTCNTYEKVHPIDPQDVMDKMEQESKQFIDIAEYEGNKKSLKQLKSVECHKKELKTIGIKGLKKNIDERKFHIRTTITKADDLQPETNDRNLHQISGLQQTLQPPMQENLDAKNIINLDSSIFTRSIEDVALSISKRIEKTNIHLNCHIDDLLIEEALQPLEFHLFDHHGSKHQLGRKNHEESPNMKLQTSYSLGNFNEVCSTSRRSEWRESELKHPYGLEKCGEEYIIDTASNIFESLIGSSETTYGSLKDVILDELLIIISTSKEERELRASVSILSTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLIYPSPIDIKTLELLPILVEIVCNSQSYYKTKKPESLLLTPHAASLMIIEEIVTSFDYATNKMHLEAISSPHVLCGLIEVAKNNNLEEFFSLTTILIKCMQFDSQCRKYVSQFTPLAPFLHLLQTDNIRAKCMALDFFHEILCIPRSSAINLLQRIKKECRINIMQILMHCANQLQPYHQILAANILIQLDTLNPSDKSMFREEAVQILLRALTYEESSEQILSASILSNLAGTYAWTGEPYTAAWLLRKTGLTSPYHQNMIRNFNWLDQSLQDTSIDVWCSKIAKCIISVGDSIFYTLERGLRSKMKKVSRDCLVAISWLGCQISKSPNSLSNSASEIILRGIEQFLYPGMELEERLLACMCMFNYASGKGKQKLMQFSEGVKESLRRLSNITWMAEELHRVADFLLRNTSRISCVHTQILEAGHNNLSISVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSIYGPLDSLLSGSTDKTIRVWKMIQRKLECLEVIVMKEPIHHLRAHGETIFAITEKQGIKLVNNSREISDIFKGKHGKCMTVAQGKLYIGCTDSSIQEYSTTHNREQEIKPPTRSWRKQSKPINSIVAYRDWLYSATSKHVEGTTFKEWKRSGKPKNSILSDKGDNVAAMEVVEDFLYLISTSSPSSIQIWLRGVPKKLGRISAGSKITSIYAANDIIFCGTEKGLIKGWIPL 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01006 1276 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 3 1276 - -
Car01g01006 1276 SUPERFAMILY ARM repeat 636 934 IPR016024 -
Car01g01006 1276 Pfam WD domain, G-beta repeat 1031 1065 IPR001680 GO:0005515
Car01g01006 1276 Pfam WD domain, G-beta repeat 981 1021 IPR001680 GO:0005515
Car01g01006 1276 SUPERFAMILY WD40 repeat-like 996 1273 IPR036322 GO:0005515
Car01g01006 1276 ProSiteProfiles Trp-Asp (WD) repeats profile. 1033 1066 IPR001680 GO:0005515
Car01g01006 1276 SMART WD40_4 980 1021 IPR001680 GO:0005515
Car01g01006 1276 SMART WD40_4 1026 1065 IPR001680 GO:0005515
Car01g01006 1276 SMART WD40_4 1195 1235 IPR001680 GO:0005515
Car01g01006 1276 ProSiteProfiles Trp-Asp (WD) repeats profile. 1007 1030 IPR001680 GO:0005515
Car01g01006 1276 Gene3D - 1128 1275 IPR015943 GO:0005515
Car01g01006 1276 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1033 1066 - -
Car01g01006 1276 PANTHER OS04G0584500 PROTEIN 3 1276 - -
Car01g01006 1276 Gene3D - 974 1127 IPR015943 GO:0005515
Car01g01006 1276 Gene3D - 504 973 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01006 Car-Chr1 9527534 9535703 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01006 - - gmx:100782870 1890.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01006 01 9527534 9535703 Car01g01006 01 9527534 9535703 ECH