Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01000 ATGGCAGATCCAAGTTTCTTTGTTGGAGTGATAGGTAACATAATCTCAATTCTCATGTTTCTTTCTCCTTTACCAACATTTTGGAGAATAATAAAGCAGAAATCTACAGAAGATTTTTCGAGTTTTCCTTATATATGCACATTGCTTAACTCCTCTTTGTGGACTTACTATGGAACCATAAAGGATGGAGAATATCTTGTGGCAACTGTTAATGGATTTGGCATTGTGGTGGAGACAATCTACATTCTTCTATTTCTCATATATGCTCCCAAAAAAATAAGGGTGAAGACAGCAATTGTAGGTGGGATATTGGATGTGGGAGTATTTGCAGCAGCAGTAGTTGCAACTCAATTAGCATTACAAGGAGAGGCTCGTAGTGGTGCTGTGGGTATTATGGGTGCAGCTTTGAACATTCTTATGTATGCATCACCTCTTGCTGTCATGCTAGGAGCATCCAACACTTGCACGTGCTCATCAATCATCATTACAACTTTGCAAAATTGA 504 0.3869 MADPSFFVGVIGNIISILMFLSPLPTFWRIIKQKSTEDFSSFPYICTLLNSSLWTYYGTIKDGEYLVATVNGFGIVVETIYILLFLIYAPKKIRVKTAIVGGILDVGVFAAAVVATQLALQGEARSGAVGIMGAALNILMYASPLAVMLGASNTCTCSSIIITTLQN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01000 167 PANTHER RAG1-ACTIVATING PROTEIN 1 4 148 - -
Car01g01000 167 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET17 4 148 - -
Car01g01000 167 Gene3D - 7 93 - -
Car01g01000 167 Pfam Sugar efflux transporter for intercellular exchange 7 92 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01000 Car-Chr1 9473070 9475173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01000 1 148 Miscellaneous Gene Families AT4G15920 58.389 2.60e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01000 K15382 - gmx:100808537 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01000 01 9473070 9475173 Car01g01000 01 9473070 9475173 ECH