Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00992 ATGACTAAAGACACAGCGGGACCGAGTGGAGGTGCATTTCACGCGGTTCATGCGGAGCGTGACTTACAATCCAATTGGGAAGTTGACCTAGCCAAGAAACTTGAAGAGTATTTGCTTAAAATTTGTTCCGGTGAAATCACTGGTGAAGAAGAAGGAAACATTCATGTGAATTTTGCTGAAGCTGCTTTGCTGCTTCAGGGTTCCATACAGGTGTATAGTCGAAAGGTTGAATATCTTTACAACTTGGTATTGCGTGCTTTGGAGTTCCTTTCTCAGAAAAGACAGCCAGATAATGTAGATGGGGCATCAGTCCAACAAGAAGAAAGTGGCCCCTCTGCCGTTGCTGCTGATGGAGAAGAAAATGATCAATTTTGGGGTTTAGATGACATCCCAGTTGAGGAAAAGAATTCATTGGACAGTTCAACAGGCAAAGAAGTGAATTTGGATCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGGGAATTGGAATCTTATCTGCTGTCCACTACGGACTTGTACCAAGATTTTATTTTGTTGGACACATCTGATGCTGTGGCAGTTAACGAGTTTATGAACGGCAAAAAAGCTGGTACGGCAATTAATGGTACTATTAGAGGAACCTCAACTCGTAAAAGCTTTCTTTCTCCTAGACGTTCTGGTGGAAGTGCTCGTAAATCGGTTGCAAAGAGTCAGCGTGCTAATTCCATGTGCTCTCCTAAAAATTTTAGTTTTGAAGACAAAGATGCTCGGCCCAGTTCTCCGATCTCTGCTGGTGTTGATAACTGTGACTTTGGACCTAATATGGATGATGGATTTGATACACCATGGGATGCAGACAATTCTGATGCAGATGTTGAAGATGATCCATGGAAACCTTTGAATCCTCATGAACCAGGAAACTTGAGAGTGAAGCCCTTTCGAAAAGTGAAAGCTTTAAGAAAGGTTGGCATCAAAGTGAAACGTCAAGTATCTTTGAGCACCATGTTTCCACTTGCAAAATTGCATGGTCCTATCAGTTCCGAGCTAACAGAAATGTGGGAGATGCGACGTTGTGCTCGCCAACGACAAAAGGATTCTCAATCTACTCCACCTTTATACGAGACGTTGAGGCAATCTCTTATTAACGAGGAAAATGAAACTGGTAGAACGTTTCTTAACTCTGAAGCTGATAACGACGACAACGAATTTGATAATGGATTTCCTGATTTTGATATGCCTGGCAATGATTTCATGGATGAAGAAGATCAACATCCTTTCGATAAAGAGCCTGGAGTTGATGATGTTCATGCAAATGCCGATGAAGCTGATCTGGAATTTCCAAATTCTCAGACAAGTTTGGAAGATCTTTGCCGCTCTCATCTGAATGCAATCCTAGCTAGCATAGCTGAATCTGAGAAGCAAACTGAAATGGCTGCTAGGATTTCAACATGGAAACAAAGAATTGAGCACAACTTAGAAGAACAGGATTCACACCCACCGTTTGATATCCGAGACTACGGTGTAAGAATTCTGGACAAACTATCCCTTGAAGAAAGCAGTAGCAGTGGCAGTGTCATGCCCTTTTCTGATTTGGTCAAGGGACAAGAAAAGTACAACGTATCCCGAAGTTTCTCTTCACTTCTTCAACTGGTGAACAATGGAGAAGTCAATTTACAAAGACACGATGTTCCTGGGGATTCTTTTTGTTACTCAGCTGATAATCCTTTTCATGTTAAGCTCCTCAAGCATGACAAGAAACAGGAGGTTGTGCAGCAGCAGTTTGGTATATCGAAAAAGAGAGCAAAGTCCCCAACAAAAAAACCGTCCATAAAAGAGGGTGAGAAGAAGAAAACTAGAAGAGAAAAGTCGCCCGTCAGTTCATCTTCTAGGAAACATGGACATACAGGGTTATCATCGCCTGCCAATTGTAAGTTTTCTGTAAACCATAGAAAGGTGAGTGCTATGAAGTTCTCTCCTCAATCCAAGAGAAGGCGTAGATCTCAATTCGTCGAGCCAGTTAATCTACATTCAGCAGGGTGA 2058 0.4227 MTKDTAGPSGGAFHAVHAERDLQSNWEVDLAKKLEEYLLKICSGEITGEEEGNIHVNFAEAALLLQGSIQVYSRKVEYLYNLVLRALEFLSQKRQPDNVDGASVQQEESGPSAVAADGEENDQFWGLDDIPVEEKNSLDSSTGKEVNLDHFIKPPANLVVLEGDCLDAGGDGGELESYLLSTTDLYQDFILLDTSDAVAVNEFMNGKKAGTAINGTIRGTSTRKSFLSPRRSGGSARKSVAKSQRANSMCSPKNFSFEDKDARPSSPISAGVDNCDFGPNMDDGFDTPWDADNSDADVEDDPWKPLNPHEPGNLRVKPFRKVKALRKVGIKVKRQVSLSTMFPLAKLHGPISSELTEMWEMRRCARQRQKDSQSTPPLYETLRQSLINEENETGRTFLNSEADNDDNEFDNGFPDFDMPGNDFMDEEDQHPFDKEPGVDDVHANADEADLEFPNSQTSLEDLCRSHLNAILASIAESEKQTEMAARISTWKQRIEHNLEEQDSHPPFDIRDYGVRILDKLSLEESSSSGSVMPFSDLVKGQEKYNVSRSFSSLLQLVNNGEVNLQRHDVPGDSFCYSADNPFHVKLLKHDKKQEVVQQQFGISKKRAKSPTKKPSIKEGEKKKTRREKSPVSSSSRKHGHTGLSSPANCKFSVNHRKVSAMKFSPQSKRRRRSQFVEPVNLHSAG 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00992 685 MobiDBLite consensus disorder prediction 237 254 - -
Car01g00992 685 MobiDBLite consensus disorder prediction 635 652 - -
Car01g00992 685 MobiDBLite consensus disorder prediction 597 685 - -
Car01g00992 685 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 302 595 IPR031737 -
Car01g00992 685 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 4 673 IPR031739 GO:0030261
Car01g00992 685 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 14 130 IPR009378 -
Car01g00992 685 MobiDBLite consensus disorder prediction 222 266 - -
Car01g00992 685 MobiDBLite consensus disorder prediction 97 118 - -
Car01g00992 685 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 153 295 IPR031719 -
Car01g00992 685 MobiDBLite consensus disorder prediction 612 634 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00992 K11490 - gmx:100786571 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00992 01 9366429 9372052 Car01g00992 01 9366429 9372052 ECH