Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00990 ATGGCGAGAAACACTACAGACATTAACCAATCTTCTCTCCTCCGCTATTGCTCTTCCAACGTTTCTGGCTTCCCTCTTTCCCCAACTCATTTCAATCTCTCTCAGTTTGGACATGGACAGTCCAATCCCACTTACTTGATGGAAGTTGGTTCAAATGGATCGGCTGTGAAGCGCTATGTTCTTAGGAAGAAGCCTCCTGGTGAATTATTGGCTTCAGCTCATGCTGTTGAAAGAGAGTTTCTGGTTCTCCAGGCTCTAGGCAACCAAACCAAAGTTCCAGTTCCTAAAGTTTTCTGTTTATGCAATGATGCAACTGTTATTGGGACACCATTTTATATTATGGAGTATTTGGAAGGAAGGATATTCATTGATCCCAAATTACCTGGTATATCACCAGAGAGTAGGAGGGCAATTTACCGTGAAACTGCTAAAACCTTAGCTGCATTACATTCTGCTAACGTGGATTCCATTGGTCTGGGAAATTACGGACGACATAATGATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTCGCCTCAACCAGTGAGGGTAAACCTGCAAGCAATCCAAAAATGTTTGCCTTGATTGATTGGCTACGGCATCATATCCCTTCTGAAGATTCTTCAGGAGCAACAGCAGGTTTGGTTCATGGTGATTTTCGCATCGACAATCTTGTGTTCCACCCCACAGAGGATCGAGTAATTGGCGTACTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATATCTGTATGTCTTATATTAAAGATATTGGGAATGATAAAATTCGGGAAGGTATGGAACGTTCAGGATTGCCAGAGGGAATTCCTCCACTACCAGAATATTTGGCTGAATATTGCTCTCTAATGGGAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTACATTGCCTTTTCTTTGTTCCGTGGGGCTTCAATTTATGCAGGAGTGTATAGTAGATGGGTTAAGGGTAATGCATCTGGTGGTGAGCGTGCTCGTAACACAGAAGTACTTGCTAATGGTCTTATTGATGCTGCTTGGGAATTTGTTGAACGCAAATTTGTGCTTCCTCAGCAACCTCCTCCAGGTGTAAATGCAAAAGAATTTTCAAAAGAGTTAGTGAAGGGGAATGAAATGCAGGGAATCCAAAATGAGGGGAGGTTTGTTCCTAGTGAAAAGGTTTTAGTGCTGAGGAATAAAATAACTAAGTTCATGGAGGAACACATATACCCCATGGAAGAGGAATTTTATAAACTTGCCCAGTCAGATGCACGTTGGACTGTTCACCCAGCAGAGGAAAAATTGAAGGAGTTAGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTGTTGATAGTGCTGCGAGGGCAAAGAAAATTCTTTATGATGGGAGCAATAATGATCTCTCTGCTGATGCAAATAACTTGTTATTGGGTGCTGGTCTAACAAATCTCGAATATGGATACCTTTGTGAGACGTTGGGTCGTTCTGTTTGGGCTCCACAAATATTTAACTGTGGTGCGCCTGACACTGGTAATATGGAGGTTTTATTGCGCAATGGAAATAAAGAACAAATGCAACAATGGCTTATTCCTTTGCTTGAGGGGACAATTAGGTCTGGATTTGCAATGACAGAACCACAAGTTGCATCTTCTGATGCAACCAATATCGAGTGTTCCATCAAAAGGCAAGGAGATTCATATATTATAAATGGGAGAAAATGGTGGACAAGTGGTGCTATGGACCCAAGATGCAGAGTTCTCATAGTCATGGGGAAAACTGACTTCAACGCGCCGAGGCATAAACAACAATCGATGATCTTAGTGGATACTCAGACTCCTGGTGTTCACGTAAAGAGACCTTTGATGGTGTTTGGCTTTGATGATGCACCTCATGGACACGCAGAAGTAATATTCGATAATGTTCGTGTGCCTGCCACAAATATCTTAATGGGTGAAGGACGTGGGTTTGAGATCGCTCAAGCTAGGCTAGGTCCTGGAAGGATGCACCATTGTATGAGACTAATAGGCGCTGCCGAGCGAGGCATGCAATTGATGGTTCAAAGAGCTCTTAGTAGAAAAGCATTTGGGAAATTTATTGCTCAACATGGCTCATTTGTTTCAGATATAGCTAAGTGCCGAATAGAGCTAGAGCAGACTAGATTGTTGGTGTTAGAAGCTGCGGACCAGCTTGATCGTTATGGGAACAAAAAAGCTCGAGGGATAATTTCAATGGCTAAGGTAGCTGCACCAAACATGGCATTAAAGGTACTTGACATGGCGATGCAAGTGCATGGAGCAGCCGGTTTATCATCTGACACAGTCCTTGCACATCTGTGGGCAACTGCGAGGACGTTGAGAATCGCAGATGGTCCGGATGAAGTCCATCTAGTTACCATAGGCAAGTTAGAATTACAGAGAGCCAAGCTTTGA 2457 0.4302 MARNTTDINQSSLLRYCSSNVSGFPLSPTHFNLSQFGHGQSNPTYLMEVGSNGSAVKRYVLRKKPPGELLASAHAVEREFLVLQALGNQTKVPVPKVFCLCNDATVIGTPFYIMEYLEGRIFIDPKLPGISPESRRAIYRETAKTLAALHSANVDSIGLGNYGRHNDYCKRQIERWAKQYVASTSEGKPASNPKMFALIDWLRHHIPSEDSSGATAGLVHGDFRIDNLVFHPTEDRVIGVLDWELSTLGNQMCDVAYICMSYIKDIGNDKIREGMERSGLPEGIPPLPEYLAEYCSLMGRKWPVAEWKFYIAFSLFRGASIYAGVYSRWVKGNASGGERARNTEVLANGLIDAAWEFVERKFVLPQQPPPGVNAKEFSKELVKGNEMQGIQNEGRFVPSEKVLVLRNKITKFMEEHIYPMEEEFYKLAQSDARWTVHPAEEKLKELAKKEGLWNLWIPVDSAARAKKILYDGSNNDLSADANNLLLGAGLTNLEYGYLCETLGRSVWAPQIFNCGAPDTGNMEVLLRNGNKEQMQQWLIPLLEGTIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGRKWWTSGAMDPRCRVLIVMGKTDFNAPRHKQQSMILVDTQTPGVHVKRPLMVFGFDDAPHGHAEVIFDNVRVPATNILMGEGRGFEIAQARLGPGRMHHCMRLIGAAERGMQLMVQRALSRKAFGKFIAQHGSFVSDIAKCRIELEQTRLLVLEAADQLDRYGNKKARGIISMAKVAAPNMALKVLDMAMQVHGAAGLSSDTVLAHLWATARTLRIADGPDEVHLVTIGKLELQRAKL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00990 818 Pfam Acyl-CoA dehydrogenase, middle domain 549 650 IPR006091 GO:0016627
Car01g00990 818 Pfam Acyl-CoA dehydrogenase, C-terminal domain 662 810 IPR009075 GO:0016627
Car01g00990 818 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 8 818 - -
Car01g00990 818 SUPERFAMILY Protein kinase-like (PK-like) 29 333 IPR011009 -
Car01g00990 818 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 396 675 IPR009100 GO:0016627
Car01g00990 818 Gene3D - 548 662 IPR046373 GO:0016627
Car01g00990 818 CDD ACAD10_11_N-like 32 298 IPR041726 -
Car01g00990 818 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 8 818 - -
Car01g00990 818 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
Car01g00990 818 Pfam Phosphotransferase enzyme family 34 279 IPR002575 -
Car01g00990 818 Gene3D - 663 817 - -
Car01g00990 818 Gene3D - 119 362 - -
Car01g00990 818 Pfam Acyl-CoA dehydrogenase, N-terminal domain 404 544 IPR013786 GO:0016627|GO:0050660
Car01g00990 818 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 660 814 IPR036250 GO:0016627
Car01g00990 818 Gene3D - 397 546 IPR037069 GO:0016627|GO:0050660
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00990 8 816 Acyl Lipid Metabolism Gene Families AT3G06810 74.293 0.0 1261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00990 K00249 - gmx:100788184 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00990 01 9351148 9359074 Car01g00990 01 9351148 9359074 ECH