Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00955 ATGGGTTGTTACAAAAGGTTAATACTAATACCTTTTGGGCTATTAATTTTCATTATGGTGGTAGCATTAGTAGTTGAAGGAAGGGTACCCTTTGCATGTGACCCAAAAAACGGTTTAACAAGAGGGTACATATTTTGCAATAAAAACGTGCCAATTCATGTGAGAGTACAAGACCTTATAGGAAGACTCACATTGGCAGAAAAGATAAGACTTGTTGTGAACAATGCAATTGAAGTTCAAAGACTTGGAATACAAGGTTATGAGTGGTGGTCGGAGGCTTTACACGGCGTTTCAAATGTGGGTCCCGGTACTAAATTCGGTGGGCCCTTCCCCGCCGCCACTAGTTTTCCTCAAGTTATCACCACCGCTGCTTCTTTCAATCAATCTTTGTGGCTTCAAATTGGACGGGTTGTGTCCGATGAAGCAAGAGCAATGTATAATGGTGGAGCGGCAGGATTGACATATTGGAGTCCTAATGTAAATATTTTCCGTGACCCTCGGTGGGGTCGTGGCCAGGAGACTCCCGGCGAAGACCCTACTTTGGCTGGAAAATATGCAGCGAATTATGTTCAAGGATTACAAGGCGACGGTGCCGGGAACCGGCTCAAGGTTGCTGCTTGTTGTAAACATTACACTGCCTATGACCTTGATAACTGGAATGGTGTAGACAGGTTTCATTTCAATGCCAAGGTAAGTAAACAAGACTTGGCAGACACATATGACATACCATTCAAATCGTGCGTGTTGGAGGGAAAGGTTGCGAGTGTAATGTGTTCCTACAATCAAGTGAATGGTAAACCAACCTGTGCCGATCCTGAACTCCTTCGCAACACTATCCGTGGCGAATGGCGCCTCAACGGGTACATAGTTTCAGATTGTGATTCGGTTGGAGTTTTTTATGACAACCAACATTACACAAAAACACCCGAAGAAGCAGCGGCGGACGCCATAAAAGCAGGCCTTGATTTGGACTGTGGGCCATTTTTGGCCCTTCATACAGATGGTGCTATTAAGCAAGGGCTTATTTCAGAGAATGATCTTAACCTTGCTTTAGCTAACCTTATTACGGTCCAAATGAGATTGGGTATGTTTGATGGAGAACCATCGGCCCAACCATATGGGAATTTAGGCCCACAAGATGTTTGCACACCGGCCCATCAACAACTTGCACTTGAAGCAGCTAGACAGGGTATTGTCCTTTTACAAAACAAAGGAAACACATTGCCACTGTCTCCTACACGATACCGTACCGTTGGAGTCATTGGTCCCAATTCAGATGTTACTGTTACAATGATAGGGAATTACGCTGGTGTGGCGTGTGGTTATACGACGCCGTTGCAAGGGATTGCTAGATACGTGAGGACCGTTCATCAAGTGGGATGTAGAGATGTGAGTTGTGGTGGGAACCAACTATTTGGGTCGGCAGAGACGGTAGCAAGGCAGGCTGATGCAATAGTATTAGTAATGGGCTTAGACCAGTCCATAGAAGCAGAATTTAGAGATAGAGATGGGCTTCTTTTACCGGGCCTCCAACAAGAGCTAGTGTCTAGGGTGGCAAGGGCCGCAAGAGGCCCAGTTATCTTGGTCATCATGTCTGGTGGCCCAATTGATGTTACATTTGCCAAAAATGATCCCAAGATTAGTGCCATTTTGTGGGTTGGTTATCCTGGCCAAGCTGGAGGAACTGCCATTGCTGATGTCATTTTTGGAAGAACTAACCCAGGAGGAAGGTTACCTATGACATGGTACCCACAAGATTATGTGACCAAAGTGCCAATGACAAACATGGACATGCGTCCAAACCCAGCAACAGGGTACCCAGGAAGAACCTATAGATTCTACAAGGGCCCAGTAGTGTTCCCATTTGGGCATGGGCTTAGTTACACAAGATTCACCCAAACCTTAGTACTTGCTCCCAAACAAGTCTCAATCCCTTTTGCAAGCCTTCAAGCCCAAGCCAAAGCCCAAGCCTTCACAAACTCAAGTTACAAAGCAGTGAAAGTGAGTCATGCAAATTGTGATGAAATGGAAGTAGGGTTCCATGTGGATGTGAAAAATGAAGGGTCAATGGATGGGACCTACACCCTTCTCATTTTCTCAAAAGCACCTCATGGAAAATGGTCAGCTTTGAAACAATTGGTGAGCTTTCATAAGACCTATGTTCCAGCTGGATCAAAGACACGTGTCAATGCTGGTATTCATGTTTGCAACCACCTTTCCATTGTGGATGAGTTTGGGGTTCGAAGAATCCCAATTGGTGAACATGAACTTCAAATTGGTGATCTCAAACATTCTATTTTTGTCCAAACTTCGGACCAAATCAAACATTAA 2331 0.4492 MGCYKRLILIPFGLLIFIMVVALVVEGRVPFACDPKNGLTRGYIFCNKNVPIHVRVQDLIGRLTLAEKIRLVVNNAIEVQRLGIQGYEWWSEALHGVSNVGPGTKFGGPFPAATSFPQVITTAASFNQSLWLQIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAGKYAANYVQGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDIPFKSCVLEGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWRLNGYIVSDCDSVGVFYDNQHYTKTPEEAAADAIKAGLDLDCGPFLALHTDGAIKQGLISENDLNLALANLITVQMRLGMFDGEPSAQPYGNLGPQDVCTPAHQQLALEAARQGIVLLQNKGNTLPLSPTRYRTVGVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYVRTVHQVGCRDVSCGGNQLFGSAETVARQADAIVLVMGLDQSIEAEFRDRDGLLLPGLQQELVSRVARAARGPVILVIMSGGPIDVTFAKNDPKISAILWVGYPGQAGGTAIADVIFGRTNPGGRLPMTWYPQDYVTKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLSYTRFTQTLVLAPKQVSIPFASLQAQAKAQAFTNSSYKAVKVSHANCDEMEVGFHVDVKNEGSMDGTYTLLIFSKAPHGKWSALKQLVSFHKTYVPAGSKTRVNAGIHVCNHLSIVDEFGVRRIPIGEHELQIGDLKHSIFVQTSDQIKH 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00955 776 Pfam Glycosyl hydrolase family 3 N terminal domain 111 351 IPR001764 GO:0004553|GO:0005975
Car01g00955 776 PANTHER BETA-D-XYLOSIDASE 1 12 772 - -
Car01g00955 776 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 628 IPR002772 GO:0004553|GO:0005975
Car01g00955 776 Gene3D Immunoglobulins 657 776 IPR013783 -
Car01g00955 776 SUPERFAMILY (Trans)glycosidases 43 397 IPR017853 -
Car01g00955 776 Gene3D - 55 372 IPR036962 GO:0004553|GO:0005975
Car01g00955 776 SMART Fn3_like_2 694 763 IPR026891 -
Car01g00955 776 Gene3D - 384 629 IPR036881 GO:0004553|GO:0005975
Car01g00955 776 PRINTS Glycosyl hydrolase family 3 signature 116 135 IPR001764 GO:0004553|GO:0005975
Car01g00955 776 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Car01g00955 776 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Car01g00955 776 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 631 IPR036881 GO:0004553|GO:0005975
Car01g00955 776 PANTHER SUGAR HYDROLASE-RELATED 12 772 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00955 Car-Chr1 8945621 8952660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00955 1 769 Glycoside Hydrolase AT5G49360 70.732 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00955 - - gmx:100805839 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00955 01 8945621 8952660 Car01g00955 01 8945621 8952660 ECH