Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00954 ATGAATTCCAAATGGGTATTTTTTGTATTGATCATAGCAACAATGTTAGTAACACTGGAAGCACAAACATCAGTGAAACCATTGGTGAAAACAGTGAAGGGAAAGAAAGTATGTGACAAAGGGTGGGAATGCAAAGGTTGGTCTGTGTATTGTTGCAATGAGACAATCTCTGACTATTTACAAACATACCAATTTGAGAATTTGTTTTCAAAGAGGAATGATCCTGTGGCACATGCTGCTGGATTTTGGGACTATCGTTCTTTTATTACTGCTGCTGCACTTTATCAGCCTCTTGGATTTGGAACAAGTGGTGGAAAACATGGTGGTCAGAAAGAGGTTGCTGCTTTCCTTGGTCATGTTGGAAGCAAGACATCTTGTGGTTATGGGGTAGCTACTGGGGGACCCTTAGCTTGGGGTTTATGCTACAATAAGGAATTGAGCCCTGATAAATTCTATTGTGATGATTACTACAAATTAACCTATCCATGCTCTCCTGGTGCAGCTTACTATGGTCGTGGTGCCATACCAATTTACTGGAATTACAACTATGGAAAAGCTGGGGAAGCATTAAAAGTGGATCTATTAAACCATCCAGAATACATAGAACAAAATGCAACATTAGCCTTCCAAGCAGCAATATGGAAATGGATGACCCCACCTGAAAAACACATACCTTCAGCCCATGATGTTTTTATTGGAAATTGGAAACCAACAAAAAATGACACATTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATCAATGTTTTATATGGTGATCAAGTTTGTGGCCAAGGTTCTGATAATGAAGCAATGAATAACATAATTTCTCATTATCTTTATTACCTTGATTTATTGGGAGTTGGTAGAGAAGAGGCAGGGCCTAATGAAATTCTCTCTTGTGCTGAACAAGCTGCTTTTAAACCATCTGGCTCACCTTCTTCAACAAGTACTTGA 957 0.3929 MNSKWVFFVLIIATMLVTLEAQTSVKPLVKTVKGKKVCDKGWECKGWSVYCCNETISDYLQTYQFENLFSKRNDPVAHAAGFWDYRSFITAAALYQPLGFGTSGGKHGGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDDYYKLTYPCSPGAAYYGRGAIPIYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAAIWKWMTPPEKHIPSAHDVFIGNWKPTKNDTLSKRVPGFGATINVLYGDQVCGQGSDNEAMNNIISHYLYYLDLLGVGREEAGPNEILSCAEQAAFKPSGSPSSTST 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00954 318 PIRSF Endochitinase 1 308 IPR016283 GO:0004568|GO:0005975
Car01g00954 318 PANTHER CHITINASE-RELATED 9 310 - -
Car01g00954 318 CDD chitinase_GH19 64 301 - -
Car01g00954 318 Gene3D Endochitinase, domain 2 144 203 - -
Car01g00954 318 Gene3D - 64 307 - -
Car01g00954 318 Pfam Chitinase class I 63 291 IPR000726 GO:0004568|GO:0006032|GO:0016998
Car01g00954 318 PANTHER - 9 310 - -
Car01g00954 318 SUPERFAMILY Lysozyme-like 56 307 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00954 Car-Chr1 8927926 8930529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00954 21 307 Glycoside Hydrolase AT3G16920 80.836 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00954 - - gmx:100805300 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00954 01 8927926 8930529 Car01g00954 01 8927926 8930529 ECH