Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00949 ATGAGGACAAGAGCATTGAAGGAAAATCAACAATTCGTTGGAATTGTTGCCTTGGAGTCATTGCAGTTAGGGTTTCGAGTTCATTCCCCAAAACTTGATTCCCTCTCTCCTTCTACCTGTTCCTCAAACCCTAAATTGAACTCCAACTTCGATGATTCAGTATCTTTGCTTTTTGCTTTTAAATTTTTAGTTGCTATCATGGGCGCGCCCGATAAATCGCAGGCCAACGTTAATTCGATGCAGCGTGTCAAGGTCTACCGTCTCAATGATGATGGAAAATGGGATGACCAGGGCACTGGGCACGTCACCGTTGATTATTTGGAGCGGTCAGAGGAGCTGGGTTTATTAGTTTACGACGAAGAAGACAATGAGACTATACTTTTGCATCGCATCTGTTCTGAAGACATTTACAGAAAACAAGAAGATACAATTGTTTCATGGAGAGATCCACAATATGCCACCGAAGTGGCGCTCAGCTTTCAAGAACCTAGCGGATGTTCTTACATATGGGACCATATTTGCAACGTGCAAAGGAATATGCAATTCAATACTTTAAATGGTGAGGCATTTCACAGTGTAAACAGCGAGTTAAGGGAGTTGCCTGCTGTTGAGTTATCAACACTTCCTTTGATTCTTAAGACCGTGGTTGAGAGTGGCATTACAGATCAGTTGCGACTTACAGAATTAATATTAACTGATCAAGATTTTTTTCGGATGCTTGTGGAAGTATTCAGAGTTTGTGAAGATTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAGTGAAAGGAATCATTTTGCTTAATAGTACACAAATTTTTGAGCGAATGTTCAGTGATGAATTTATAATGGATATAATTGGTTCTCTTGAATATGATCCAGAGGTTCCTCATGTTCAACATCATCGTAAATTCTTAAAGGAACATGTTGTTTTTAAAGAGGCCATACCTATAAAAAATTCTATTGTGTTATCCAAGATACATCAAACTTATAGAATTGGCTTTCTGAAGGATGTTGTTTTGGCTAGAGTGTTAGATGAGGCAATTGCTGCAAATCTCAACTCCATGATACATGCAAACAATGCCACTGTTGTTTCTTTATTGAAAGATGACAGTCCGTTTATCCGGGAGTTGTTTGCTAGGTTAAAATCGCCCACCACCTCTCCTGAATCAAAGAAAAATATGATCCATTTCTTGCATGAGTTTTGTGGTTTAAGCAAGAGCTTACCGATGGTACAGCAGCTTCGACTTTTTAGGGATATGGTGAATGAGGGCATCTTTGACATTGTCGCAGATGTCCTGCGAAGTCAAGACAAGAAGCTTGTACTTACTGGAACAGATATTCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTCCGGTCCTATGTGGTTCGACAGGAAGGAATCGCACTTCTTGGACTATTGGTTAGAGGAATGATAACAGATTTTGGAGATGACATGCATTGCCAGTTTCTTGAGATTCTTCGCATTCTATTAGACTCATGCACATTGTCTGGCGCACAGAGAGACACTATTATTGACATTTTCTATGAGAAGCATTTGGGTCAACTGATCAAAGTGATAATGGCATCATGTCCTCCAGAAAATATTGCTAATGCCAGCAACAAATTAATAGATCCTGACCAAGGAATCCAAGATCAGAGTGGGACGAAGCCAGAGATTCTATTAAACATATGCGAACTACTATGCTTCTGTGTTCTGCACCACCCATATCGGATAAAGTGCAATTTTCTTCTGAATAATGTGATTGATAAAATTTTGTTACTGACTCGAAGAAGAGAAAATTATCTGGTTGTTGGTGCTGTTCGGTTTGTTCGTACCATTCTCTCACGTCATGAGGAGCATCTCATAAATCATTTTGTTAGAAACAACCTTCTCAAACCAGTTGTAGATGTCTTCATTGCTAATGGCAGTCGCTACAATCTGCTAAATTCTGCTGTTCTTGAGCTTTTTGAGTACATTCGCAAGGAGAATCTGAAATTATTGATAAAATATATAGTTAATTCTTTCTGGGACCAGCTAGTGAAATTTGAGAATTTGGTTTCCATTCATTCACTGAAAGTAAAATATGAGCAGTGTTTGGATAATGATGGGACAAAAGGTACTATTACGAATGACCTTCAAAAACGACTTGAGGAGCGTGCTTTAGAGAAAGAAGAGGAAGATTACTTTAATGAGGATAGTGATGATGAAGATTCAACCTCTACGTCTATTTCACGTAATCCAAAAGGGCAGCAGCAGCAACGCGTGTTATCCAATGGAGCAGCTGCGAGCTGCTCAGAGTTTAGTTTGAGGTCTGGCGGACTGGTTGACTatgatgacgatgaggatgatgaagatTACAAGCCACCACCTAGGAAGCATCCAGAAGCTTCTGAAGAGGATGAAGGGCCAATGGAGTCCCTCGGAATGAAAAGAAAGTTGCCTTTGAACAATAAGGAGACCAATCTTGTACGTAAGCAGAAGTTGGCCAATAGTTCAAAACCAAAAGATAATGTTTTTTCTGCCTTGTGTTCAACATTGAGCCATGCTGTACTGCCTGGTAAGAAAAATGAAATCAACGTTCATACTGGTCATTCTACAATTGATGGGGGGATGAATTCAAGTGAAGTCAATTATGTAAAGGAGATAAATGTTTCAAGAAGCTGCTCTGGAAATAGCAACACAACAGCTGAAGAGAATCATGTAGAGAAAGAAACTGGCATACATAAAAACTTCTCTGATGGGTCGAATGGCATTACTGATAATAGACAGTTGGGTGGGGAGGAACATTCACTGGTTTCACCCAAATCCTCGCCAGAGATGGCCGTAAATGGTTTGTAA 2850 0.393 MRTRALKENQQFVGIVALESLQLGFRVHSPKLDSLSPSTCSSNPKLNSNFDDSVSLLFAFKFLVAIMGAPDKSQANVNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLLVYDEEDNETILLHRICSEDIYRKQEDTIVSWRDPQYATEVALSFQEPSGCSYIWDHICNVQRNMQFNTLNGEAFHSVNSELRELPAVELSTLPLILKTVVESGITDQLRLTELILTDQDFFRMLVEVFRVCEDLENMDGLHMIFKIVKGIILLNSTQIFERMFSDEFIMDIIGSLEYDPEVPHVQHHRKFLKEHVVFKEAIPIKNSIVLSKIHQTYRIGFLKDVVLARVLDEAIAANLNSMIHANNATVVSLLKDDSPFIRELFARLKSPTTSPESKKNMIHFLHEFCGLSKSLPMVQQLRLFRDMVNEGIFDIVADVLRSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIALLGLLVRGMITDFGDDMHCQFLEILRILLDSCTLSGAQRDTIIDIFYEKHLGQLIKVIMASCPPENIANASNKLIDPDQGIQDQSGTKPEILLNICELLCFCVLHHPYRIKCNFLLNNVIDKILLLTRRRENYLVVGAVRFVRTILSRHEEHLINHFVRNNLLKPVVDVFIANGSRYNLLNSAVLELFEYIRKENLKLLIKYIVNSFWDQLVKFENLVSIHSLKVKYEQCLDNDGTKGTITNDLQKRLEERALEKEEEDYFNEDSDDEDSTSTSISRNPKGQQQQRVLSNGAAASCSEFSLRSGGLVDYDDDEDDEDYKPPPRKHPEASEEDEGPMESLGMKRKLPLNNKETNLVRKQKLANSSKPKDNVFSALCSTLSHAVLPGKKNEINVHTGHSTIDGGMNSSEVNYVKEINVSRSCSGNSNTTAEENHVEKETGIHKNFSDGSNGITDNRQLGGEEHSLVSPKSSPEMAVNGL 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00949 949 Gene3D - 76 194 IPR011993 -
Car01g00949 949 MobiDBLite consensus disorder prediction 776 823 - -
Car01g00949 949 SUPERFAMILY PH domain-like 81 177 - -
Car01g00949 949 MobiDBLite consensus disorder prediction 726 761 - -
Car01g00949 949 PANTHER ATP SYNTHASE GAMMA-RELATED 67 875 - -
Car01g00949 949 MobiDBLite consensus disorder prediction 744 761 - -
Car01g00949 949 SUPERFAMILY ARM repeat 368 682 IPR016024 -
Car01g00949 949 Gene3D - 365 680 IPR011989 -
Car01g00949 949 Pfam Phosphatase 4 regulatory subunit 3 234 421 IPR006887 -
Car01g00949 949 PANTHER BINDING PROTEIN-RELATED 67 875 - -
Car01g00949 949 MobiDBLite consensus disorder prediction 891 949 - -
Car01g00949 949 MobiDBLite consensus disorder prediction 789 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00949 Car-Chr1 8843454 8873071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00949 K17491 - gmx:100802657 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00949 01 8843454 8873071 Car01g00949 01 8843454 8873071 ECH
Car07g00518 07 4553267 4570144 Car01g00949 01 8843454 8873071 PCT