Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00934 ATGGCAGGTACAAGGAGATTAGGCGTTGCTGTGGACTTCTCACCATGTAGCATTAAGGCACTAAAATGGACATTGGATAACATCGCAAGAGAAGGGGATCACATCATTCTCGTTATTATTCGACCTGAACAATACGAGCATGGCGAAATGCAGCTCTGGGCAGTTACTGGCTCACCTCTCACACCTCTGGCTGAGTTCTCTGACCCAACACTCTTCAAGAAATATGGACTCGAATCCAATTCTGAAGTAATTAATATTGCCACGTCTGCTGCGAACCAAAAAAAAGTTGTGGTACTAGTGAAGATATATTGGGGAGATGCTCGTGAGAAATTATGTGAAGCAATTGAACATATACCTCTTGATAGTCTTATCATGGGAAACAGAGGTCTTGGTACCATCAAAAGGGTTATAATGGGCAGTGTTAGCAACTACATAGTGAATAACGCTTCGTGTCCAGTTACTGTGGTGAAGAGTTCAGATTAA 483 0.4244 MAGTRRLGVAVDFSPCSIKALKWTLDNIAREGDHIILVIIRPEQYEHGEMQLWAVTGSPLTPLAEFSDPTLFKKYGLESNSEVINIATSAANQKKVVVLVKIYWGDAREKLCEAIEHIPLDSLIMGNRGLGTIKRVIMGSVSNYIVNNASCPVTVVKSSD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00934 160 PRINTS Universal stress protein signature 4 22 IPR006015 -
Car01g00934 160 PRINTS Universal stress protein signature 117 129 IPR006015 -
Car01g00934 160 PRINTS Universal stress protein signature 135 157 IPR006015 -
Car01g00934 160 Gene3D HUPs 4 160 IPR014729 -
Car01g00934 160 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 157 - -
Car01g00934 160 PANTHER IMP2'P 4 159 - -
Car01g00934 160 CDD USP_Like 6 156 - -
Car01g00934 160 Pfam Universal stress protein family 5 157 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00934 Car-Chr1 8673490 8674487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00934 - - gmx:100816534 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00934 01 8673490 8674487 Car01g00934 01 8673490 8674487 ECH