Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00931 ATGGCTCTGAGATTTTTCTGCACCACAAATATCTCTGTCTCAACTCAACACCACGTGAAAGTAGAGTTGAAAAACAACAATAACAATAAGAAGTATGTTCTTCAGAATCAGGTGAAGAATCTCCTCAACACTCTGGAGTTTTCTTCCATTTCATCCTCTACTCCACTTGATTCTCTCCAAAGAGGCAATTGGGTTAAGCTCATTTGTGGTGCAAGCTTTGAAGATGTTGTTCATATCAGAAATCTCAGTCTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCAGCTGATGCATCGGTTGTCAGTGCTGTGAATGAAGGAATTGAAGCTGCAACAGACATCTTACGCCGCGTAAGACGGCCGTGGGTGATGATCAGTGTCAACGACGATACCGATCTTCACTTTCGTAAGGCCGAATTTGATCCAGAGGACTGTCCAACAGACTGTTTGCGCCCTTGTGAAAACGTGTGTCCTGCAAATGCAATCTCATTCCAAGACAAATCTACTTCACAAATTTCATATGATACTGAAGCATTAATAGCACAAAAGGATGGTGTCATAACAGAACGCTGTTACGGCTGTGGTCGCTGTCTTCCGGTTTGTCCCTATGATAAAATAAGAGAGGTAACATATGTTAGAGATGCTATTACAACTGCTCAACTTATCAAGAGAAATGATGTTGATGCTATAGAGATACACACAAGTGGAAGGCAGAGTAGACCGTTCGAAGAACTATGGTGTGCTTTAGGCGATTCAGTAGAAAATTTGAGGCTAGTAGCAGTTAGCTTACCTAATGTTGGAGATTCAACAATATCCTCTATGAACAAAATGTTCTCTGTCATGAAACCAAATCTTAAAAGCTTCAACTTATGGCAGATAGCTAAAGCAACAGAAAGACCTCCTGGCTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGAAGGGTTGAAAAAAGGACTTTTTCAAATAACTAGTACAGGTAATGTTGTCACTTGGTCACTTAATACCTTGTAA 1026 0.4074 MALRFFCTTNISVSTQHHVKVELKNNNNNKKYVLQNQVKNLLNTLEFSSISSSTPLDSLQRGNWVKLICGASFEDVVHIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAATDILRRVRRPWVMISVNDDTDLHFRKAEFDPEDCPTDCLRPCENVCPANAISFQDKSTSQISYDTEALIAQKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTAQLIKRNDVDAIEIHTSGRQSRPFEELWCALGDSVENLRLVAVSLPNVGDSTISSMNKMFSVMKPNLKSFNLWQIAKATERPPGFLQLAGGTNAHTIEGLKKGLFQITSTGNVVTWSLNTL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00931 341 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 38 209 - -
Car01g00931 341 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 138 169 IPR017896 -
Car01g00931 341 SUPERFAMILY 4Fe-4S ferredoxins 121 211 - -
Car01g00931 341 Pfam Iron-Sulfur binding protein C terminal 301 326 IPR021039 -
Car01g00931 341 Pfam Iron-Sulfur binding protein C terminal 223 295 IPR021039 -
Car01g00931 341 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 184 213 IPR017896 -
Car01g00931 341 Gene3D - 145 227 - -
Car01g00931 341 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 IPR017900 -
Car01g00931 341 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER 38 209 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00931 - - gmx:100804088 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00931 01 8635168 8645763 Car01g00931 01 8635168 8645763 ECH