Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00924 ATGAGTCTTTACTTGAGCAAAACACTCATATTGGGTATCATGTTTAGGATTTGTATGGTATTGCTATCTTTCAAGATTAGCATATCATATGATATCCAAGCTTCATTTATTTTTGGAGACTCCTTGCTCGATGTAGGGAACAACAATTACATTTCTTCACTTGCCAAAGCAAATCATTACCCTTATGGAATTGATTTTGGAATGCCCACTGGTCGTTTTTGCAATGGAAGAACAGTTTTGGATGTTATAGAGCAAGAATTGCGTCTAGGCTTTTCTCCTCCTTACTTGTCTCCTACTACTTCTGGATCAGTGATTTTAAAGGGTGTCAATTATGCTTCTGCTGCAGCTGGAATTCTCAATTACTCTGGTCACATTTTTGGTGGTCGAATCAACTTCGATGCACAGATTGATAACTTTGCAAATACGAGAGAAGAAATCATCAACAAAATTGGTGTTCCTGCAACTCTCAATTTGCTTAAGAATGCTCTCTTCACAGTAGCATTTGGCTCAAATGATTTCCTTGATAATTATTTGACACCTCCAATCTCAGTTCCAGAGATGGAGTTGTTGTCTCCAAAATCATTTGTTGTCATCATGATCTCAACATTCAGAGTACAACTAACCAGGCTATTCAATCTAGGAGCAAGAAAAATGGTTGTGGTAAATGTAGGGCCTATTGGGTGTATACCATTTATGAGAGATTTTAACCCACAAGCTGGAAACAAGTGTGTCACATTTCCTAATCAACTAGCTCAATTATTTAACACCCAATTGAAGAGACTAATTGAAGAACTAAGGAACAATTTAGAAGGTTCATTAGTTGTTTATGCAGATGTTTATCACATTATGGAAGATATCATCATGAATTACAATAAATATGGTTTTGAGAATCCTAATTCCGCATGTTGTCACCTTGCTGGTCGATTTGGAGGATTAATTCCATGTGATGGTTATTCAAAAATTTGTGTAGATCGATCTAAGTACGTTTTTTGGGACACTTTTCATCCTAGTGATTCTGTTAATGTTATCATCGCAAAACGTTTGTTAAATGGTGATGTCAATGATGTTTCACCTATAAATGTTTGGCAACTCCTACAAGCTTGA 1104 0.3614 MSLYLSKTLILGIMFRICMVLLSFKISISYDIQASFIFGDSLLDVGNNNYISSLAKANHYPYGIDFGMPTGRFCNGRTVLDVIEQELRLGFSPPYLSPTTSGSVILKGVNYASAAAGILNYSGHIFGGRINFDAQIDNFANTREEIINKIGVPATLNLLKNALFTVAFGSNDFLDNYLTPPISVPEMELLSPKSFVVIMISTFRVQLTRLFNLGARKMVVVNVGPIGCIPFMRDFNPQAGNKCVTFPNQLAQLFNTQLKRLIEELRNNLEGSLVVYADVYHIMEDIIMNYNKYGFENPNSACCHLAGRFGGLIPCDGYSKICVDRSKYVFWDTFHPSDSVNVIIAKRLLNGDVNDVSPINVWQLLQA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00924 367 SUPERFAMILY SGNH hydrolase 157 350 - -
Car01g00924 367 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Car01g00924 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 20 366 - -
Car01g00924 367 Gene3D SGNH hydrolase 25 351 IPR036514 -
Car01g00924 367 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
Car01g00924 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 20 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00924 Car-Chr1 8527972 8531324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00924 32 367 Acyl Lipid Metabolism Gene Families AT4G10950 37.647 1.11e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00924 - - mtr:MTR_2g033920 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00924 01 8527972 8531324 Car01g00924 01 8527972 8531324 ECH