Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00913 ATGGCTCGGAAGGGTAATCAACAGAAGAATGGATTGAACCACAGGAAAGGGGTTTCTGGCGGTGTCCTTCCGGGTATGAAAGGTCATGAAGGAGGGCAAGCGAAGGTTTTTCCGGGGGAGGAACTTGCAAATGGCGACCGTGGTCTTTCACAGAAAGTGTGTGAGACTAGTTCTGCTGGTGATGAAGATAACAGTGAGCGAAAATCTGAGAAATTTTCTCGGAAAGATAAGCAAGGGATGAGTGCTAAGCATGATCTTGAGGAATCATTGTTCTTTGGGAATGGTAGTGTGAAAGCTGAAGTTCCAACACAAGAAGTAAATCAGACTTTGCCTAGAAGTAATCAAGCTCAACAGAGTATGAAGAGTAGATTGAACCATTTACTTGAAGGTTTACAGTTGAGAAGTATGATAGAAAATGCGGAGCTTGCTGATCATGTGATTATTAGGAGATTAAGATTGTTGGCATTTTCCATTTTTACAGCAGTTAACGAGTGGCTAACCAAGCAGAAGCCATTATTTGTATCTATTAGAACCATCGTTTTAGAAGCTTGTGCAAATTTCAGAACAAAATTTAAGCAGGTGTATCCTGTTGTTCTGACTTGGCTCATGCACTTTGGGAACATAATCCTTCTATTATCACTGTTTTGGTTGGACTGTGCCTTTCGGGGTATGGATTCATTTGTGCGAATGGGTACGACGTCCTTCTTCTCTGTTATATGGTGCAGCATATTCTCCGTGGTTAGTATGATAGGGATGCTCAAGTTTATGGTTGTCCTGGGCCTGGCTACCTTGGTTGGATTTTATGTTGGGTTCGTGCTTGCAACTTTAGTAGTCGCAATCCTTGGAGTTGTTATGTTATGGTTTTATGGTAGCTTTTGGACAACAACTTTTTTCATCATCCTTGGAGGATTGGCATTTTTGTTACGTCATGAACGTGTGGCACTACTTGTCACCACGGTGTATTCAGTCTATTCTGCTTGGCTGTACGTTGGGTGGCTTCGTTTGTTCTTGGCTTTTAATTTAGCTTTCATCTCAAGTGATGTTTTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTGGATCCAATCCATTTGAACAAAGATCTGGAATGCACAGTCAACCAGGTTTCGGAAGTGATGAACCAACGTCGGCTTCTTCCTTTGAAAATGGATCAGGACCATCTGCAGATCGTAATGCAGGAGTCCCTTCGACTAGTGGGGTTGATTCAGATGTAACTTCTGAAGATGAAGTTGTTCGATTGTTGAACAGCTCTGATCACTATTCAGCACTAGGCTTGACGCGCTATCAAAATATAGATGTTTCAGTACTGAAGCGGGAATATAGAAAGAAGGCAATGTTGGTACATCCTGATAAAAATATGGGTAATGAAAAGGCTGTAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGCTTCTTAGTGTATTTAACAGATTTCATAATGCTCCCCGCAGGAATAGTAGGCATGGATTTTTTTCTTCTGGATTTGCGCAGCCAGATGTAGATGGTGAGGACCCATTTGGTGATTCAAGGCGAATAGCTTGCAAGAGATGTGGTGGCTTTCATCTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCACCAAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCTCAACCATTTCTTTTTGGCTTAATGCAAAAGGTAGATGCTCCTTTTGCTTACGTGTGTGCGGATAGCAAAATTTACAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACTCATAAGCCAAGTTTTCATGTGAACACCAGTATAATGTCCAAGAATAATTCTGGCAAAGGAACCAGCTCTTCAAGTCAAAGAGGCGGGCGAGTGCCGAACCCTAATATCCCAACACCTAATTTTGAAGAACCTATGACTGAGGAAGAATTTGTCGAGTGGTTACAGAATGCAGTACAATCAGGCGTGTTTGACAATGTCAATGGCGGCACTGCCCCAGAGAGCCCATCCGCCAAATCCGGAAATGGAACGAAAAATCCAGGCACCGGCAGTGGCGTCGGTAGCGGCAGCAAAAGAAAGAAAAAAGGGAAAAAATGGTGA 2196 0.424 MARKGNQQKNGLNHRKGVSGGVLPGMKGHEGGQAKVFPGEELANGDRGLSQKVCETSSAGDEDNSERKSEKFSRKDKQGMSAKHDLEESLFFGNGSVKAEVPTQEVNQTLPRSNQAQQSMKSRLNHLLEGLQLRSMIENAELADHVIIRRLRLLAFSIFTAVNEWLTKQKPLFVSIRTIVLEACANFRTKFKQVYPVVLTWLMHFGNIILLLSLFWLDCAFRGMDSFVRMGTTSFFSVIWCSIFSVVSMIGMLKFMVVLGLATLVGFYVGFVLATLVVAILGVVMLWFYGSFWTTTFFIILGGLAFLLRHERVALLVTTVYSVYSAWLYVGWLRLFLAFNLAFISSDVLIYFLKKNIDQQSGSNPFEQRSGMHSQPGFGSDEPTSASSFENGSGPSADRNAGVPSTSGVDSDVTSEDEVVRLLNSSDHYSALGLTRYQNIDVSVLKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFNRFHNAPRRNSRHGFFSSGFAQPDVDGEDPFGDSRRIACKRCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLMQKVDAPFAYVCADSKIYNATEWYICQGMRCPANTHKPSFHVNTSIMSKNNSGKGTSSSSQRGGRVPNPNIPTPNFEEPMTEEEFVEWLQNAVQSGVFDNVNGGTAPESPSAKSGNGTKNPGTGSGVGSGSKRKKKGKKW 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00913 731 MobiDBLite consensus disorder prediction 59 82 - -
Car01g00913 731 ProSiteProfiles dnaJ domain profile. 427 494 IPR001623 -
Car01g00913 731 SMART dnaj_3 426 486 IPR001623 -
Car01g00913 731 MobiDBLite consensus disorder prediction 362 413 - -
Car01g00913 731 CDD DnaJ 427 483 IPR001623 -
Car01g00913 731 PRINTS DnaJ domain signature 449 464 IPR001623 -
Car01g00913 731 PRINTS DnaJ domain signature 466 486 IPR001623 -
Car01g00913 731 Pfam DnaJ domain 427 491 IPR001623 -
Car01g00913 731 MobiDBLite consensus disorder prediction 688 731 - -
Car01g00913 731 Gene3D DnaJ domain 414 506 IPR036869 -
Car01g00913 731 Pfam Cleavage inducing molecular chaperone 537 634 IPR032843 -
Car01g00913 731 MobiDBLite consensus disorder prediction 1 82 - -
Car01g00913 731 MobiDBLite consensus disorder prediction 633 659 - -
Car01g00913 731 MobiDBLite consensus disorder prediction 688 718 - -
Car01g00913 731 ProSitePatterns Nt-dnaJ domain signature. 471 490 IPR018253 -
Car01g00913 731 PANTHER OS03G0832900 PROTEIN 1 730 - -
Car01g00913 731 PANTHER OS03G0832900 PROTEIN 1 730 - -
Car01g00913 731 SUPERFAMILY Chaperone J-domain 422 504 IPR036869 -
Car01g00913 731 MobiDBLite consensus disorder prediction 633 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00913 Car-Chr1 8380524 8385897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00913 1 692 Miscellaneous Gene Families AT5G49580 52.714 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00913 K09534 - gmx:100789594 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00913 01 8380524 8385897 Car01g00913 01 8380524 8385897 ECH