Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00911 ATGGATAAATTAGGAGATGGGATTTTTCCAGATGAGGTTGTTATGCAAATTCTTGCTAGGTTACCAGTGAAATCCCTTTTTAGGACCAAAACTGTGTGCAAATTGTGGAATAGGTTGAGTTTGGATAATTATTTCATTCAATTATACAATGAGATTTCTAGGAAGAACCCTATGATTTTGGTGGAGATTTCAGATTCGTTATTAGAGTCCAAATCTAGCCTAATATGTGTTGATAATTTAAGGGGTGTCTCTGAATTTTCGCTTAATTTCTTGAATGATCGAGTTAAGGTTCGAGCTTCTTGTAATGGATTGTTGTGTTGTTCTAGTATTCCTGATAAGGGTGTGTACTATGTTTGTAATCCGGTTACTCGCGAGTTTAGGCCAGTGACTCGATTTTATCCCGATGGCGAAGCTACATTGGTTGGTTTGGCCTGTGATTCAGCGTATCAGAAGTTTAATGTTGTTCTCGCCGGTTGTCATCGCACATTCGGTCATAGGCCGGATGGAAAATTCATATGTTTGGTTTTTGATTCGGAGTTGAACAAGTGGAGGAAGTTGATTTCTTTTCAAGATGACCATTTTACTCATATGAATAAGAATCAAGTTGTTTTTGTCAATAATGCTTTGCACTGGTTGACTGTTAGCTCCACTTATATACTCGTGCTTGATTTAAGTTGCGATGTTTGGAGGAAGATGTCGTTGCCGTATGACCCGAGTTATGGATCGGGAAATAGGACTTATCTGTTGGAGTTCGATGGTTGTCTTTCTGTTATTCAAATTTCGGAAGCATGGATGATTATATGGGTGTTAAAAGATTACTGGAAAGATGAATGGTGCATTGTAGATAAGGTGAGTTTGAGATGTATCCGAGGAATGGTTCCGGGTATTTTCCCGATCAGTCAGACAAGTGAGTATGTTTTCTTGGCAACTCATAAACAGGTTTTGGTGTATCAACGCAAGAGCCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACGCTTCCATTGTGGTTTTCGGCGCATGCGTATCGCAGCACAATGTTCTCGTGTAACTGA 1062 0.3927 MDKLGDGIFPDEVVMQILARLPVKSLFRTKTVCKLWNRLSLDNYFIQLYNEISRKNPMILVEISDSLLESKSSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKGVYYVCNPVTREFRPVTRFYPDGEATLVGLACDSAYQKFNVVLAGCHRTFGHRPDGKFICLVFDSELNKWRKLISFQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDVWRKMSLPYDPSYGSGNRTYLLEFDGCLSVIQISEAWMIIWVLKDYWKDEWCIVDKVSLRCIRGMVPGIFPISQTSEYVFLATHKQVLVYQRKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00911 353 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 351 - -
Car01g00911 353 TIGRFAM F_box_assoc_1: F-box protein interaction domain 100 318 IPR017451 -
Car01g00911 353 SMART fbox_2 9 49 IPR001810 GO:0005515
Car01g00911 353 Gene3D - 9 45 - -
Car01g00911 353 Pfam F-box-like 10 43 IPR001810 GO:0005515
Car01g00911 353 SUPERFAMILY F-box domain 9 58 IPR036047 GO:0005515
Car01g00911 353 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 351 - -
Car01g00911 353 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00911 Car-Chr1 8373489 8374723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00911 - - gmx:100811223 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00911 01 8373489 8374723 Car01g00911 01 8373489 8374723 ECH