Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00209 ATGAGTTCATTTTCTCTAATGTGTGTCTTGGGCTTAATATTCATAATGGGTCACACAGCACATGCCCAAGACTCACCAACAGATTATGTGAACGCACACAACGCAGCAAGATCCGAGGTTGGTGTTCCAAATATTGTTTGGGACAACACTGTTGCTTCTTTTGCACAAAGCTATGCCAATCAACGCAAGGATTGTCAATTGATGCACTCGGATGGTAATCATGGCGGTTACGGCGAGAATATCGCGTTGAGCTCCGGCGACATGAGTGGCACAGAAGCGGTGAGTTTGTGGGTGGATGAGAAAGCAAACTATGATTATAATAGTAACTCATGTGTTGGTGGTGAATGCCTTCATTATACTCAAGTTGTTTGGAGAGATTCACATCGTGTTGGATGTGCCAAAGTGAAATGTGATAATGGTGGCACATTCATTACTTGCAACTATTCTCCCCCTGGCAACTATATTGGCCAAAAACCATACTAA 483 0.4327 MSSFSLMCVLGLIFIMGHTAHAQDSPTDYVNAHNAARSEVGVPNIVWDNTVASFAQSYANQRKDCQLMHSDGNHGGYGENIALSSGDMSGTEAVSLWVDEKANYDYNSNSCVGGECLHYTQVVWRDSHRVGCAKVKCDNGGTFITCNYSPPGNYIGQKPY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00209 160 Pfam Cysteine-rich secretory protein family 30 148 IPR014044 -
Car01g00209 160 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 5 160 - -
Car01g00209 160 SMART SCP_3 24 156 IPR014044 -
Car01g00209 160 Gene3D CAP 19 160 IPR035940 -
Car01g00209 160 PRINTS Venom allergen 5 signature 45 63 IPR002413 -
Car01g00209 160 PRINTS Venom allergen 5 signature 91 106 IPR002413 -
Car01g00209 160 PRINTS Venom allergen 5 signature 115 134 IPR002413 -
Car01g00209 160 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Car01g00209 160 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Car01g00209 160 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Car01g00209 160 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Car01g00209 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Car01g00209 160 SUPERFAMILY PR-1-like 25 160 IPR035940 -
Car01g00209 160 CDD CAP_PR-1 26 160 - -
Car01g00209 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 5 160 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00209 Car-Chr1 1604864 1605651 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00209 K13449 - gmx:100805116 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00209 01 1604864 1605651 Car01g00209 01 1604864 1605651 ECH