Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00208 aTGATGAGGTCACATATGATCTTAGCCATTTTCTTCTTATTCATGTGTTCAAACCTTTGTTGCATAGCACAAAACTCCCCTCAAGACTTCGTTGATGTGCATAATGAAGCTCGAGAAGTTGTTGGTGTTGGTCCACTCTATTGGAACCATACACTTGAAGCCTATGCACAAAATTATGCAAACAAAAGAATAAAAGATTGTGAACTCGAACACTCAATGGGTCCATTTGGTGAAAACCTTGCTGAGGGTTACGGTGAAATGAATGGTTCGGACGCTGTGAAGTTTTGGCTAACTGAAAAGCCATACTATGATTATAACTCTAACTCTTGTGTTCATGATGAGTGTTTGCATTATACTCAAATTATTTGGAGTGATTCGGTTCATCTTGGTTGTGCTAAGTCCAAATGTCAAAATGGGTGGGTGTTTGTTATTTGTAGCTATTCACCACCTGGCAATGTTGAAGGTCAACGACCTTATTGA 480 0.3896 MMRSHMILAIFFLFMCSNLCCIAQNSPQDFVDVHNEAREVVGVGPLYWNHTLEAYAQNYANKRIKDCELEHSMGPFGENLAEGYGEMNGSDAVKFWLTEKPYYDYNSNSCVHDECLHYTQIIWSDSVHLGCAKSKCQNGWVFVICSYSPPGNVEGQRPY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00208 159 SMART SCP_3 25 155 IPR014044 -
Car01g00208 159 Gene3D CAP 24 159 IPR035940 -
Car01g00208 159 Pfam Cysteine-rich secretory protein family 31 147 IPR014044 -
Car01g00208 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 2 159 IPR001283 -
Car01g00208 159 CDD CAP_PR-1 27 159 - -
Car01g00208 159 PANTHER - 2 159 - -
Car01g00208 159 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Car01g00208 159 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Car01g00208 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Car01g00208 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Car01g00208 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Car01g00208 159 SUPERFAMILY PR-1-like 10 159 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00208 Car-Chr1 1592952 1593531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00208 K13449 - gmx:100527778 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00208 01 1592952 1593531 Car01g00208 01 1592952 1593531 ECH