Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00198 ATGGCTGCCACCAGAGCGATAACCATAGCCAGCAATTCAACCTACTCTCTTCTTACCAACAAACCCTTTCTCGCTGGCCGTGCCCTTCGCCTCAACAACCTCAAGCTTTTTTCTAGAACCAACAGGTCTTATACTTGCAAGGCCATCTATTACCCTGAGGTTACTGTCAAGGATGAAGGTCAACCTCAAACCCTCGATTATAGAGTCTTCTTTCTCGACAAATCTGGCAAAAAGGTTTCTCCCTGGCATGATATTCCATTGCAGCTAGGTAATGGTGTCTTCAACTTCATTGTTGAGATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCCACTGACGAGCCTTTCACTCCCATTAAACAAGATACGAAAAAGGGAAAGCTTCGATTTTACCCCTATAATATTCATTGGAACTATGGCTTACTTCCACAAACATGGGAAGATCCATCTCTTGCAAACCATGAAGTTGAAGGAGCATTTGGAGATAACGATCCAGTTGATGTGGTTGAGATTGGCGAAAGGCAAAGGAAAATAGGAGAAGTTCTCAAGGTCAAACCCTTGGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAAGCTTCACTTGTAAATGATGTTGATGACGTTGAGAAGCATTTTCCTGGAACCCTCACTGCAATTAGGGACTGGTTCAGAGACTACAAGATTCCTGATGGGAAGCCTGCTAATAGATTTGGTCTTGGCAACAAAGCAGTAAATAAGGATTATGCGCTTAAGATAATCACAGAGACGAACGAGTCTTGGAGTAAACTTGTGAAGAGATCAATTCCTGCTGGAGAGTTGTCACTTGTGTAA 870 0.4241 MAATRAITIASNSTYSLLTNKPFLAGRALRLNNLKLFSRTNRSYTCKAIYYPEVTVKDEGQPQTLDYRVFFLDKSGKKVSPWHDIPLQLGNGVFNFIVEIPKESSAKMEVATDEPFTPIKQDTKKGKLRFYPYNIHWNYGLLPQTWEDPSLANHEVEGAFGDNDPVDVVEIGERQRKIGEVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGNKAVNKDYALKIITETNESWSKLVKRSIPAGELSLV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00198 289 CDD pyrophosphatase 92 271 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Car01g00198 289 SUPERFAMILY Inorganic pyrophosphatase 55 285 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Car01g00198 289 ProSitePatterns Inorganic pyrophosphatase signature. 162 168 - -
Car01g00198 289 Gene3D Inorganic pyrophosphatase 53 289 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Car01g00198 289 Pfam Inorganic pyrophosphatase 96 273 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Car01g00198 289 PANTHER SOLUBLE INORGANIC PYROPHOSPHATASE 6, CHLOROPLASTIC-LIKE 32 289 - -
Car01g00198 289 PANTHER INORGANIC PYROPHOSPHATASE 32 289 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00198 K01507 - gmx:100798544 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00198 01 1526987 1530072 Car01g00198 01 1526987 1530072 ECH