Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00187 ATGGCTTCTGCCACCGCCTTGCTCCGCTCTTTCCGCCGCCGAGATGCTGCTTCTGCTTCCGTCTCTGCCTATCGTTCGTTGACGGGAAGCACTAAGCCTGCGTATGTAGGTCACAGTTGGTCAAGTTTGTCTCGGCCATTCAGTTCAAGACCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACTAATTCGTGTGTTTCCGTTATGGAAGGAAAGAATCCCAAAGTCATTGAGAATTCTGAAGGTGCACGAACTACACCATCCGTGGTTGCCTTCAACCAGAAAGGCGAGCTGCTCGTAGGGACACCAGCCAAGCGTCAGGCTGTAACTAACCCAACAAACACTCTCTTTGGTACCAAGCGTTTGATTGGTAGACGTTTTGAGGATCCCCAAACACAAAAGGAGATGAAAATGGTTCCATACAAGATTGTTAAGGCTCCCAATGGAGATGCATGGGTTGAAGCTAATGGGCAGCAATATTCCCCTAGCCAAATTGGTGCCTTTGTTCTCACCAAGATGAAGGAAACTGCTGAATCTTATCTTGGAAAATCAGTTTCCAAGGCAGTAGTTACTGTTCCAGCTTATTTCAATGATGCTCAAAGGCAGGCGACAAAAGATGCTGGTAGAATTGCAGGTCTTGATGTGCAGAGAATCATTAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGAACAACAAGGAGGGTCTCATTGCAGTTTTTGACCTTGGTGGGGGAACATTTGATGTTTCCATCTTAGAAATTTCCAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGACTTTGACAATGCCTTGTTGGAGTTCCTGGTGAACGAATTCAGGAGGACTGAGAGTATTGACCTTTCTAAGGATCGGCTTGCTTTGCAAAGGCTCCGCGAAGCTGCAGAGAAAGCCAAGATTGAACTGTCTTCAACATCTCAGACAGAGATAAACCTACCTTTCATCACTGCTGATGCATCTGGTGCTAAGCATCTGAACATTACATTGACTAGATCTAAGTTTGAGGCTCTAGTAAATAACTTGATTGAAAGGACTAAGGCTCCGTGTCTGAGCTGTTTGAAGGATGCTAACATATCTATCAAGGATGTCGATGAGGTTCTTCTTGTTGGAGGGATGACCCGTGTGCCTAAAGTCCAAGAGGTGGTTTCGGCTATCTTTGGAAAGGCTCCTAGTAAAGGAGTAAATCCTGATGAGGCAGTTGCCATGGGAGCAGCACTCCAGGGTGGTATCCTACGTGGAGATGTTAAAGAGCTACTACTCCTTGATGTAACGCCACTTTCTCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGGTTAATCAACCGTAACACTACTATTCCTACCAAGAAGAGTCAGGTCTTTTCAACGGCAACTGAAAATCAAACACAAGTAGGTGTCAAAGTGTTACAAGGTGAGCGGGAAATGGCTGCCGACAACAAAATGCTTGGAGAATTTGAACTTGTTGGCATTCCTCCTGCCCCAAGAGGTGTGCCTCAGATTGAGGTCACGTTTGACATTGATGCCAATGGCATCGTTACTGTGTCTGCAAAAGACAAGTCCACTGGTAAAGAACAACAAATCACTATTAGGTCATCTGGTGGACTCTCAGATGATGAGATTGACAAGATGGTCAAAGAAGCAGAGTTACATGCTCAGAAAGACCAAGAGAGAAAGGCTCTTATTGATCTCAGAAACAGTGCAGATACTACTATCTACAGCATTGAGAAGAGTTTAAGTGAATACAGAGACAAGATTCCCAGTGAAGTGGCCAAGGAGATTGAGGATGCAGTTTCAGATTTGAGAAGTGCGATGTCAGGGGACAATGTTGATGAAATCAAATCAAAGCTTGATGCTGCAAACAAAGCTGTGTCCAAGATTGGGCAGCACATGTCAGGTGGTTCAAATGGCGGTTCCTCGGCTGGAGGTTCTCAGGGTGGGGACCAAGCTCCTGAGGCAGAATATGAAGAGGTGAAGAAGTGA 2034 0.4538 MASATALLRSFRRRDAASASVSAYRSLTGSTKPAYVGHSWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFEDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLEFLVNEFRRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCLSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSAIFGKAPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTATENQTQVGVKVLQGEREMAADNKMLGEFELVGIPPAPRGVPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIDKMVKEAELHAQKDQERKALIDLRNSADTTIYSIEKSLSEYRDKIPSEVAKEIEDAVSDLRSAMSGDNVDEIKSKLDAANKAVSKIGQHMSGGSNGGSSAGGSQGGDQAPEAEYEEVKK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00187 677 CDD HSPA9-like_NBD 53 428 - -
Car01g00187 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 242 255 IPR018181 -
Car01g00187 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 59 66 IPR018181 -
Car01g00187 677 Coils Coil 298 325 - -
Car01g00187 677 Gene3D - 232 412 - -
Car01g00187 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 428 552 IPR029047 -
Car01g00187 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 430 586 IPR029047 -
Car01g00187 677 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 580 654 IPR029048 -
Car01g00187 677 SUPERFAMILY Actin-like ATPase domain 56 236 IPR043129 -
Car01g00187 677 MobiDBLite consensus disorder prediction 641 677 - -
Car01g00187 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 383 397 IPR018181 -
Car01g00187 677 Gene3D - 57 425 - -
Car01g00187 677 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 38 659 - -
Car01g00187 677 TIGRFAM prok_dnaK: chaperone protein DnaK 56 648 IPR012725 GO:0005524|GO:0006457|GO:0051082
Car01g00187 677 Gene3D Actin; Chain A, domain 4 275 362 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 55 68 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 83 95 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 106 114 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 190 210 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 248 258 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 380 396 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 411 431 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 434 453 - -
Car01g00187 677 PRINTS 70kDa heat shock protein signature 515 531 - -
Car01g00187 677 Gene3D - 553 650 IPR029048 -
Car01g00187 677 Pfam Hsp70 protein 56 648 IPR013126 GO:0005524|GO:0140662
Car01g00187 677 PANTHER HEAT SHOCK PROTEIN 70KDA 38 659 IPR013126 GO:0005524|GO:0140662
Car01g00187 677 Hamap Chaperone protein DnaK [dnaK]. 53 675 IPR012725 GO:0005524|GO:0006457|GO:0051082
Car01g00187 677 MobiDBLite consensus disorder prediction 645 663 - -
Car01g00187 677 SUPERFAMILY Actin-like ATPase domain 237 428 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00187 Car-Chr1 1422830 1426702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00187 56 660 Miscellaneous Gene Families AT5G42020 50.639 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00187 K04043 - gmx:100804559 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00187 01 1422830 1426702 Car01g00187 01 1422830 1426702 ECH
Car06g01440 06 13966353 13969993 Car01g00187 01 1422830 1426702 PCT