Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00179 ATGATGCAGATGCAGACTCTGGGTTCGCTTTGTTTGTTCGTTTTTCTTCATCATCACTCTGTTCTCTCTTTATATCACAAGTTTCTTCGATTTTCCCTTCGTTTTGTTCTCTTCATGGATTTACCTTCCACCTTCAATTTCCTCACACAAGCCAGTGAACTTGGTTGTGGTTTCGTTCTCCTTGGTTATTTCTCTCGTCTTTTCAATTTCGTTGGTCTTGTTTTGATCTTCGGTATTTGTCTCAAGATTCTGCGTTTTTCTGATACACCCATCTTTTGGAATCCAACAAAGGTTCATAATTTGGATACCCAATTGAAATCACCTGCGAAATGTGATGATGGGGTAGTGGCTTCCGAGGAGAAAGAGAGGGATGAGAATTTGGAAGATGAGGTGTTTGATGTAATGTCGCTCAGAAATTTGGTGAAAATGGAGAGACAGAGATACCATGCTGCGTGTGCGGAGATTGAGAAAGAACGTTTGGCGGCTTCCACGGCTGCGGAGGAGGCAATGGCAATGATCTTGAGGTTGCAGAATGAGAAGAGTTCGGTCGAGATTCAAGCCAATCAGTTTCGGAGGATGGTGGAGGAGAGGCAAGAGTATGATCAGGAAGTGATCGAATCATTGAGGTGGAATGTTGTGCAACATGAGTCTCAGAAGAGCTTTTTGGAGGAACAGTTGGGGATTTATAAGGAGAAACTGAGGGAATTTATGAATGATGACGAAATTGAGCTACTTGAAGGGGCTGATTTCACTAGGGAGTTTTGTAATTTCTCTGTTGAATATGATGATGCTTCTTAG 798 0.4236 MMQMQTLGSLCLFVFLHHHSVLSLYHKFLRFSLRFVLFMDLPSTFNFLTQASELGCGFVLLGYFSRLFNFVGLVLIFGICLKILRFSDTPIFWNPTKVHNLDTQLKSPAKCDDGVVASEEKERDENLEDEVFDVMSLRNLVKMERQRYHAACAEIEKERLAASTAAEEAMAMILRLQNEKSSVEIQANQFRRMVEERQEYDQEVIESLRWNVVQHESQKSFLEEQLGIYKEKLREFMNDDEIELLEGADFTREFCNFSVEYDDAS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00179 265 PANTHER BNAANNG28530D PROTEIN 17 264 - -
Car01g00179 265 ProSiteProfiles GTD-binding domain profile. 132 230 IPR007656 -
Car01g00179 265 PANTHER ZEIN-BINDING PROTEIN 17 264 - -
Car01g00179 265 Coils Coil 205 239 - -
Car01g00179 265 Coils Coil 166 186 - -
Car01g00179 265 Pfam Zein-binding 136 226 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00179 Car-Chr1 1343875 1345432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00179 - - gmx:100815236 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00179 01 1343875 1345432 Car01g00179 01 1343875 1345432 ECH
Car06g01427 06 13888540 13889696 Car01g00179 01 1343875 1345432 PCT