LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g02383	atgacaaagaCTTCAACAACCAAAAGTAGCAGCTCATGGAACATCTGGAGTGATAGAGTTGTGGCTGTTAGAGAATTACGATTTTCCTTAGAAGGGGATGtcattgaaaatgatattgGTGGGGTGTCCATGAATGATAATGTTACTGAACGTGACTTCCTGCGAACTGAGGGGGATCCTGCTGCAGCTGGTTACACAATTAAAGAAGCAGTGGCACTCTCTAGAAGTGTGGTTCCTGCACAAAGGGCCCTTGCATGGCATATACTTTCTTCTGTGCTTGAAAGGGCATTACACAACATTTGCGAAGACCAAGCTGATCATACAGTGAGAAATGGAAACAGAGTTGACAAATCTGTTGACTGGGAGGCTGTTTGGGCTTATGCACTTGGGCCAGAACCTGAGCTCATTTTGTCACTTAGGATATGCCTTGATGATAACCACTATTCTGTTGTTCTGGCCTGTGCAAAGGTAGTTCAGTGTGTGCTGAGTTATGATgtaaatgagaaattttttgatgTCTCTGAGAAAATAGCAAGTAATGACAAGGACATCTATACTGCTCCTGTTTTTAGGAGTAAATCAGATATTGATGATGGCTTCTTTCATGGTGGATTTTGGAAATACAGTGCAAAACCTTCAAATATTCTTCCTTTCAGGGAGGATTCCATGGATGATGAAACTGAAGGGAAACATACAATACAGGATGATATAGTGGTTGCTGGACAGGATTTTACTGCAGGTCTTGTGCGTATGGGAATCCTTCCTAAACTTCGCTATCTTTTGGAGACAGATCCCACAGTAGCTTTGGAAGAATGTCTGGTTTCCATACTGGTTGCCATAGCAAGGCATTCACCTTCATGTGCAAATGCAATCTTGGAGTGTGATAGGCTTATTCAGACAATTGTGCACAGATTTACTGTTGACAATGTAGAAGTTCGGTACTCtatgataaaatttgtaatcCTGTTCAAGGTCTTAGCTCGGACAGACCAGAAAAATTGTTTGGAGTTTCTGAAGAATGGGTATTTTCAGATTATGACGTggcatttatataattatcctTCCTCTGTTGACCACTGGGTAAAGTTAGGGAAGGAAAAATGTAAACTTAGTTCAGCTCTGATTGTTGAACAAATGCGGTTCTGGAAGGTCTGCATTCAATATGGATATTGtgtttcaaacttctcggaCTTGTTTCCTGCATTGTGTTTGTGGTTAAATCCACCTTCATTCAAAAAGCTTACTGAAAACAATATTCTGAGTGAATTTACTTCCCTCTCTAGGGAGGTTTACCTTGTTTTGGAGTCTTTGGCTAGAAGACTTCCGAATTTCTTTTCACAGCAGCGTCTAAGCCATCATCTGCCAGAGGACAGTGGCGATGACAGAGGGGTGTGGTCTTGGAGCTATGTTACTCCTATGGTTGACTTAGCACTAAAGTGGATAGCAACCAGAAATGACACTGAAGTAACTAGATTGTTTGAGGAACAAAAAGGGAGAGATGACTGTCCTTTCCAAGATCTATCTGTAACTCCTTTATTGTGGGTATATGCAGCTGCCTCTCACATGCTCTTCAGCGTACTTGAAAGGGTCACACCAGAGGATACCATCAGCATGCATGTAACCGGTGGGCTTGTGCCTTGGCTCCCAGAATTTGTCCCTAAGATTGGACTTGAGTTGATTAAATATTGGCTTCAGGGTTTTTCAGTTTCCTTTGGGACAGAATGCAGAAGAGAACCTGATGGTGTTGAACCTTTTATTAAGGAGCTAATTTATTTGAGGCAGAAGAATGATCATGAAATGTCATTAGCTTCAGTATGTTGCTTGAATGGAATGGTTAAGATCATTAATGCCATTGATAATTTGATCCAGTCTGCCAAGACTGGGATCTGTAGTCTCCCATGCAAAGAACAAAGTCTCtcaaaagaaggaaagttGCTTCAAGATGGCATCATTAGCGGATTTATGGTTGAATTAAGGTTTGTGCTTGATGTTTTCATGAATTTAGTTGCTTCAAGGTGGCACTCTGTGCAGTCCATTGAGACATTTGGCAGAGGAGGACCAGCTCCAGGAGTGGGAATTGGCTGGGGTGCCCCTGGTGGAGGATTTTGGTCAGAAGATGTTTTACTGGCGCAAACAGATGCAATGTTTCTGATTCATTTGCTGGAAACCTTTCAAAATGCATTGATAGATACACAAATAGCTGAAGGAACAACCTTCGACATGCAAAGATTTAATTCTGCCTTGGGATTATGTTTGACTGCAGGACCAAAGGAAACAGTTGTTATAGAGAAGGCATTGGATTTCTTGTTGCATGTTCCTTTTCTGAAGTACCTTGATCTCTGTATTCGGCAGGTTTTCAGAAGCAGAAGTAAAACCATTAGGTGGCAATATGAAGAAGAGGATTACCTGCACTTCAGTAAAATGCTATCGTCTCATTTCAAGAGGAGATGGTTGTCTGGAAAAGTGAAGTCCAAACCCACGGGCAATAGTTGCACGAGGATTAAAACCTCTCAGAAGGACAAAACTCAGTTAGACACCATATATGAGGAGTCAGCCTTAACAAATCCATCCCATACTTCTTTAATAGTAGAATGGGCTCGCCAGAGATTGCCACTTCCAATCCACTCTTATCTTAGTCCAATCTCAACTATCACCCTTAGCAAGCAGTCTGGTCCTCAAAAAGTTTCTGGTTTACACAACTTGCAAGATTGCGGTGATTTTCTTGAAGTTGCCAAGTCTggacttttctttgttttaggtGTTGAAGCTTTGTCTATTTTACAAGGCACTATTCCCTCTCCTGTTCGGCATGTTTCTTTGACGTGGAAATTACATTCCTTGTCTGTCAATTTCCTTGTTGGGATGGAAGTCCTTGAACAGGAGCAGTCTAGGGAAACTTTTGAGGCTTTGCATGATCTTTACGGTGAGCTTCTTGATAAAGCAAGATTTACCAGAAGGGAAGGTGTTATTTCAGATGATAAAAACCATCATGAGCTTTTGAGGTTCCGATCTGAGATTCATGAAAGTTACTCAACATTTATTGAAGTCCTTGTAGAGCAATTTTCAGCTGTATCCTATGGTGATCTGATTTTTGGTCGCCAAGTTGCACTTTATCTACACCGTTGTGTTGAATCTTCTGTTCGACTTGCTGCGTGGAATGCACTGTCTAattctcttgttcttgatcTTCTGCCACCTCTAGAGAAATGCCTTTCTGGGGCTCAAGGATATCTTCAGCCTAttgagGATGATGAAGGTGTTTTGGAGGCTTATGTAAAGTCATGGACTTCTGGTGCCCTGGACAAGGCTGCAATTCGAGGATCGGTTGCATACACTCTAGTTGTCCATCATCTTTCATCGTTTATGTTTGATGTCTGTCCCACGGATAAGTTAATGTTGCGGAACAGGCTTGCTAGGCTACTCTTGCGAGATTATGCTCAGAACCAGCAACATGAGGGAATGCTGCTGAACCTCATCAATTCTAATAAGCCATCATTATCTGACATGGTCGAACAGCAGAAGTGGATGGAGGCAAGATTTGTTGTATTGGTTGAAGCATGCGAGGGAAATTCTCTGCTTCTGACCAGAGTAAACAAGTTAAAAGCCATCATAGAGAACTGTTA	3623	0.4027	MTKTSTTKSSSSWNIWSDRVVAVRELRFSLEGDVIENDIGGVSMNDNVTERDFLRTEGDPAAAGYTIKEAVALSRSVVPAQRALAWHILSSVLERALHNICEDQADHTVRNGNRVDKSVDWEAVWAYALGPEPELILSLRICLDDNHYSVVLACAKVVQCVLSYDVNEKFFDVSEKIASNDKDIYTAPVFRSKSDIDDGFFHGGFWKYSAKPSNILPFREDSMDDETEGKHTIQDDIVVAGQDFTAGLVRMGILPKLRYLLETDPTVALEECLVSILVAIARHSPSCANAILECDRLIQTIVHRFTVDNVEVRYSMIKFVILFKVLARTDQKNCLEFLKNGYFQIMTWHLYNYPSSVDHWVKLGKEKCKLSSALIVEQMRFWKVCIQYGYCVSNFSDLFPALCLWLNPPSFKKLTENNILSEFTSLSREVYLVLESLARRLPNFFSQQRLSHHLPEDSGDDRGVWSWSYVTPMVDLALKWIATRNDTEVTRLFEEQKGRDDCPFQDLSVTPLLWVYAAASHMLFSVLERVTPEDTISMHVTGGLVPWLPEFVPKIGLELIKYWLQGFSVSFGTECRREPDGVEPFIKELIYLRQKNDHEMSLASVCCLNGMVKIINAIDNLIQSAKTGICSLPCKEQSLSKEGKLLQDGIISGFMVELRFVLDVFMNLVASRWHSVQSIETFGRGGPAPGVGIGWGAPGGGFWSEDVLLAQTDAMFLIHLLETFQNALIDTQIAEGTTFDMQRFNSALGLCLTAGPKETVVIEKALDFLLHVPFLKYLDLCIRQVFRSRSKTIRWQYEEEDYLHFSKMLSSHFKRRWLSGKVKSKPTGNSCTRIKTSQKDKTQLDTIYEESALTNPSHTSLIVEWARQRLPLPIHSYLSPISTITLSKQSGPQKVSGLHNLQDCGDFLEVAKSGLFFVLGVEALSILQGTIPSPVRHVSLTWKLHSLSVNFLVGMEVLEQEQSRETFEALHDLYGELLDKARFTRREGVISDDKNHHELLRFRSEIHESYSTFIEVLVEQFSAVSYGDLIFGRQVALYLHRCVESSVRLAAWNALSNSLVLDLLPPLEKCLSGAQGYLQPIEDDEGVLEAYVKSWTSGALDKAAIRGSVAYTLVVHHLSSFMFDVCPTDKLMLRNRLARLLLRDYAQNQQHEGMLLNLINSNKPSLSDMVEQQKWMEARFVVLVEACEGNSLLLTRVNKLKAIIENC	1207

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g02383	1207	SUPERFAMILY	ARM repeat	242	362	IPR016024	-
	Bva14g02383	1207	SUPERFAMILY	ARM repeat	133	607	IPR016024	-
	Bva14g02383	1207	Pfam	RPAP1-like, C-terminal	25	96	IPR013929	-
	Bva14g02383	1207	PANTHER	TRANSCRIPTIONAL ELONGATION REGULATOR MINIYO	4	1204	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g02383	K20826		-	gmx:100819615	1657.11

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva14g02383	14	20496403	20503561	Bva14g02383	14	20496403	20503561	ECH