Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02372 ATGGCTGCAACACTTGCCTACCATCACAATATCTTCTGGAACTCTACCACACCAGAAAGGTGTTTCCCAAAACTGGTCAAAGAACGCAAATCCAACAGGAAATTCGACCTCGGAAGTGAGCCAGAATGCTCAAAGTCAAGATTCTGCTACACTACTCAGTCCAAGTGTCAAAAAGTTTATTCCTTACCACCCAATTCCTTTCTCCCAAGGGTTCTTGTTGAAACTGTTGAATCTGGGTCACTGGAAGATGCACTCAACCTGTTCGAGAAAATGAACCATCTTGATACGTATATTTGGAATGTCATGATTAGAGGATATACAGATAGAGGGTTGTTTCGTGAGGCAATTAATTTGTATCATAGAATGGGATATGATGGGATTCGTGGGGATAATTTCACGTACCCTTTTGTGATTAAAGCTTGTGGTGAATTGTTCGCGTTGATCGAAGGAGAAAAGATTCACGCCAAGTTGCATAAGATAGGACTAGATAAAGATGTTTATATTTGCAATTCTCTCATTATAATGTATGCCAAGCTTTGGCACATTGATTCAGCCTTGAGGGTTTTTGCAGAGATGCCGTCTAAAGACTTGGTTTCCTGGAACTCTATGATCAGTTCATATTCTTTTGTCAAAGAACATCTGAGCTCGTTGAAGTGCTTTAGAGAAATGCTGCAGGTTGGGATTAGGCCAGATAGGTTTAGCATGATTAGTGCTCTTAATGCCTGTTCTCTTGGGTTATATGCATCAACTGGTAAGGAATTGTATTGCATCGCACTCAGGTTGGGATTTGAATTAGATGTTATGATTCAGACATCACTTATTGACATGTATGGTAAGTGTGGCAAACTGGATTATGCAGAGAGGGTTTTTGACAGGATACCTATAAGAAATGTTGTGGCTTGGAATGCAATGATCAATAGCTATGCTCTAAATGCTCAACCGGTCAAGGCTTTTGGTTCCTTGAAAATTATGCTCCAGGCCGATAACTTGACTGTTGATAATGTGACTCTCATAAACTTGCTTCCTTCTTGCACGCAATTAGGAGCTGTTTTGCAGGGTAAGTCTATTCATGGATATACCATTAGGAAAGGATTTCTGCCTCATCCAGTATTGGAAACCGCTCTTCTTAACATGTACGGAGAGTTTGGCATATTGAAGTTGGCAGAGGTGACTTTTAATCATATGATGGAGAAGAACTTGGTAACATGGAATGCCATGATCGCTGTGTATGTGCAGAATGGGTGGAACTGCAAAGCCTTAAAACTATTTGAAGAACTTTTGAGTGAACATCTTAGACCTGATACAGTTACTGTTGCAAGTATCCTTCCTGCTTATGCTAATTTGGCATCACTAAGGGAAGGTAGGCAAATTCATGgttatattatgaaattacaGTACCTCTCAAACACAGTTgtttcaaattcaatcattTATATGTATGCAAGTTGTGGAGATCTTGAGGCAGCACGGAAAATTTTTGATCGAATGACGTGCAAGGATATAGTATCGTGGAATACCATCATCATGGCTTATGCCATTCATGGTATGGGGAGAATATCCATTGAACTGTTCTCTCAGATGGAGAGAGATGGCTTTCAGCCTAATGATAGCACTTTTGTTTCACTCTTATCATCTTGTAGCAATTCTGGCTTGGTTAACGAAGGGTGGGAATACTATAAATTGATGAAACTAAATTATGGAATGGAGCCTAAAATAGAGCACTATGGATGCATGCTCGATCTTATTGGTAGAACTGGTAAATTGGACCAAGCCACGAGCTTCATAGAAGAAATGCCACTGTTGCCTACAGCTCGGATATGGGGATCGTTATTGAATGCAAGTAGGAAGAAAGGAGACATAGAATTAGCTGAATTTGCTGCTCAGCATATCTTTTCAACAGAGAATGACAATACTGGTTGTTATGTCGTACTTTCTAATATGTATGCTGAAGTTGGTAGATGGGAGAAggtgaaagaaacaaaatctatTATGAAGAAAGAACGATCAGAGAAAACCCTAGCATACAGCATAACAGAGACAAATTTTGGGCTTCACAGATTTACTAATCACGATAGATCTCACATTGAATCCGATATGATCTATAATGTCCTAGATATCTTATCGAGGAaaatgggggaaaaaaaatgcatccACAACACTAAGTTCAAGCCATCAGACTTTGCTAGAAAAAGTGCAAATTCACCACAGAATCATAGTGTAAGATTGGCAGTATGTTTTGGACTGATTTCTACCACAATTGGAAATCCTGTTCTTGTCAGGAAAAACACAAGAATATGCGAAGATTGTCATATTGGTATAAAGAAGATTTCGGAGACTACCCGAAGAGAAATTATTGTAGGGGATTCTAAAGTGTTCCACCATTTCGGAGATGGGCACTGCTCTTGTGGCGATTACTGGTG 2420 0.3851 MAATLAYHHNIFWNSTTPERCFPKLVKERKSNRKFDLGSEPECSKSRFCYTTQSKCQKVYSLPPNSFLPRVLVETVESGSLEDALNLFEKMNHLDTYIWNVMIRGYTDRGLFREAINLYHRMGYDGIRGDNFTYPFVIKACGELFALIEGEKIHAKLHKIGLDKDVYICNSLIIMYAKLWHIDSALRVFAEMPSKDLVSWNSMISSYSFVKEHLSSLKCFREMLQVGIRPDRFSMISALNACSLGLYASTGKELYCIALRLGFELDVMIQTSLIDMYGKCGKLDYAERVFDRIPIRNVVAWNAMINSYALNAQPVKAFGSLKIMLQADNLTVDNVTLINLLPSCTQLGAVLQGKSIHGYTIRKGFLPHPVLETALLNMYGEFGILKLAEVTFNHMMEKNLVTWNAMIAVYVQNGWNCKALKLFEELLSEHLRPDTVTVASILPAYANLASLREGRQIHGYIMKLQYLSNTVVSNSIIYMYASCGDLEAARKIFDRMTCKDIVSWNTIIMAYAIHGMGRISIELFSQMERDGFQPNDSTFVSLLSSCSNSGLVNEGWEYYKLMKLNYGMEPKIEHYGCMLDLIGRTGKLDQATSFIEEMPLLPTARIWGSLLNASRKKGDIELAEFAAQHIFSTENDNTGCYVVLSNMYAEVGRWEKVKETKSIMKKERSEKTLAYSITETNFGLHRFTNHDRSHIESDMIYNVLDILSRKMGEKKCIHNTKFKPSDFARKSANSPQNHSVRLAVCFGLISTTIGNPVLVRKNTRICEDCHIGIKKISETTRREIIVGDSKVFHHFGDGHCSCGDYW 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02372 806 PANTHER BNAANNG11600D PROTEIN 73 799 - -
Bva14g02372 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 266 300 IPR002885 -
Bva14g02372 806 Pfam E motif 619 671 IPR046848 -
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 252 355 IPR011990 GO:0005515
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 356 454 IPR011990 GO:0005515
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 455 555 IPR011990 GO:0005515
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 56 144 IPR011990 GO:0005515
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 145 248 IPR011990 GO:0005515
Bva14g02372 806 Pfam PPR repeat family 398 446 IPR002885 -
Bva14g02372 806 Pfam PPR repeat family 499 547 IPR002885 -
Bva14g02372 806 Pfam PPR repeat family 95 141 IPR002885 -
Bva14g02372 806 Pfam PPR repeat 299 326 IPR002885 -
Bva14g02372 806 Pfam PPR repeat 168 196 IPR002885 -
Bva14g02372 806 Pfam PPR repeat 271 294 IPR002885 -
Bva14g02372 806 Pfam PPR repeat 198 228 IPR002885 -
Bva14g02372 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 399 433 IPR002885 -
Bva14g02372 806 Gene3D Tetratricopeptide repeat domain 556 702 IPR011990 GO:0005515
Bva14g02372 806 Pfam DYW family of nucleic acid deaminases 736 806 IPR032867 GO:0008270
Bva14g02372 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 196 230 IPR002885 -
Bva14g02372 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 502 535 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 474 502 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 198 231 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 538 570 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 401 435 IPR002885 -
Bva14g02372 806 TIGRFAM PPR: pentatricopeptide repeat domain 97 122 IPR002885 -
Bva14g02372 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 95 129 IPR002885 -
Bva14g02372 806 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 73 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02372 Bva-Chr14 20410205 20413215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02372 60 806 Glycoside Hydrolase AT3G49170 31.627 3.11e-131 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02372 - - aip:107619622 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02372 14 20410205 20413215 Bva14g02372 14 20410205 20413215 ECH