Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02353 ATGATCGTTTGCGTCGCCGTCGTAGGTCATCAGAACAACCCGCTATACATACAGAGCTTTACCGAGGCAGATGATGCTCTCAAGCTCCATCACATCGTCCACTGCTCCCTCGATGTAGTCGACGAGCGAGTGAACAATCCTAAAAAATCTGGACCCATGCTGAATGAGACGTTTCTGGGACTTCTGTATCCTACTGAAAATTACAAAGTCTATGGCTATCTGACTAATACAAAGGTAAAGTTTATCTTGGTGACAACAGATTTGGATGGTCGAGATGCAGATGTAAGAAATTTTTTCAGGAAGTTCCATGCTGCATATGTAGATGCTGTATCAAACCCATTTCATGTACCAGGGAAAAAGATAACCTCCAGAACTTTTGCAGAAAGAGTGAGCACAATTGTTAAGTCATTTGGTTTAAGTTCGGCTGGGTG 431 0.4292 MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDGRDADVRNFFRKFHAAYVDAVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSAG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02353 143 SUPERFAMILY SNARE-like 2 137 IPR011012 -
Bva14g02353 143 Pfam Sedlin, N-terminal conserved region 7 135 IPR006722 GO:0006888
Bva14g02353 143 CDD TRAPPC2L 3 134 IPR044760 GO:0006888
Bva14g02353 143 Gene3D - 1 141 - -
Bva14g02353 143 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 1 138 IPR006722 GO:0006888
Bva14g02353 143 PANTHER BNAA06G40850D PROTEIN 1 138 - -
Bva14g02353 143 SMART Sybindin_2 17 137 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02353 Bva-Chr14 20270687 20273122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02353 K20301 - vvi:100241847 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02353 14 20270687 20273122 Bva14g02353 14 20270687 20273122 ECH