Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02343 ATGTCGTCATCGAAGAAGATCATTCTGAGGAGTTCTGATGGCGAGACCTTCGAGGTGGATGAGGCGGTGGCCCTCGAATCACAGACTATGAAGCACATGATCGAAGACGGCTGCGCTGAGAGTGTTATTCCTCTGCCGAACGTCACCGCCCGCATCCTTTCCATGGTCGTTGAGTACTGCAAGAAGCACGTTGAGTCCGCCGCTTCTGATGACAAGGACAAGGACTCCAAGAGCGTTGAGGAGAGTCTCAAGACCTGGGATGCGGATTTCGTCAAGGTTGATCGGGCCACACTCTTTGATTTAAGCATGGCAGCAAACTATCTAGATATTAAGAGCCTTTTGGACTTGACATGCCAAACTGTGGGAGATATAATCAAGGGACAGACGCCAGAGGAGATACGCAAGACTTTCGGCATCAAGAATGATTTCACTCCAGATGAAGAAGAGGAGGTTAGGAGGGAAAATCAATGGGCCTTTGAGTG 482 0.4979 MSSSKKIILRSSDGETFEVDEAVALESQTMKHMIEDGCAESVIPLPNVTARILSMVVEYCKKHVESAASDDKDKDSKSVEESLKTWDADFVKVDRATLFDLSMAANYLDIKSLLDLTCQTVGDIIKGQTPEEIRKTFGIKNDFTPDEEEEVRRENQWAFE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02343 160 Pfam Skp1 family, dimerisation domain 111 158 IPR016072 GO:0006511
Bva14g02343 160 SMART skp1_3 4 110 IPR001232 GO:0006511
Bva14g02343 160 PIRSF SCF_Skp 1 160 IPR016897 GO:0006511
Bva14g02343 160 PANTHER SKP1 1 160 IPR016897 GO:0006511
Bva14g02343 160 SUPERFAMILY Skp1 dimerisation domain-like 83 158 IPR036296 GO:0006511
Bva14g02343 160 Gene3D Potassium Channel Kv1.1; Chain A 1 160 IPR011333 -
Bva14g02343 160 CDD BTB_POZ_SKP1 6 125 - -
Bva14g02343 160 SUPERFAMILY POZ domain 6 66 IPR011333 -
Bva14g02343 160 Pfam Skp1 family, tetramerisation domain 5 64 IPR016073 GO:0006511
Bva14g02343 160 PANTHER PUTATIVE-RELATED 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02343 Bva-Chr14 20210397 20212064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02343 K03094 - csv:101209382 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02343 14 20210397 20212064 Bva14g02343 14 20210397 20212064 ECH