Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02290 ATGGAAGTGAGTCTCTCTGCGAACCATCAGGGTTTGCGCTCAACCTCATGCAGttcactctctttctcttctttctctctttgcaATCTTCATTCCATCCGAATACGATTCCTTGGTTGTAGTCACAATCTCAGGCCTCCCGTTGCTCTTCGCTCTAGGAAGAAATGCAGCAAGTTAGGTCTCCTTCGCGTTCACTCTCCACGCTTTATCTTCAAAGCCTCTTTGGATTCTCAGTCCATTATCGTCATCGTCATCATATTCACTTTATCTGCTGTTTCTCTGTTATACTACCGTCACAgcaggagaaaaaagaataccaAAGAGGTCAGTGAAATACCAGGTCGCCCAAAATTTGCTTTGTCACAGGGAAGTAATGTTGGGAACCAGGCCATTCAAACCAACATTCTTGGCTTTCAGAGATTTCAAATAGAGAATTCTTTGGAAGAAATTGGGTTATTAAAAGAGAGCACTGGAGAACTGAATCATGCTTTTGAGGACAAAGAAGCCCAGATGCTGTTTTGGAGATCTACGGTGGTGCATGAAGAAGCTGTCATGACTAAGACTTCAGAGTCTTCTTCTGATTTTCTAGTCTCTAGTGTTAATAACGGTTCATCTTCAAATAATTCCGAAGTTCTAGAACAGTCTTCAGAGTCTTCTCCTGATTTTCTAGTCTCTAGTGTTAATGGTTCATCTTCAAATAATTCTGAATTGGTGCATGAAGAAACTGTCATGACTAAGACTTCAGAGACTTCATCTGATTTTCTAGTCTCTAGTGTTAATAATGGTTCATCTTCAAATAATTCTGAAGCTGTTAAACAGTCTTTTCTGCCTGTGGCATATCAATCGAGTTCGTTAGAACCTATAACTTCTGTTGAAGAAATTACTGAGTTGCATGTGGGAAGATCTCAAGATGAAAGTGACTCTAACTCTGAGTTGCTTATAATAATGGATGAATCTAAGCCTCCTGCTGCTTCTGTTGATGTGGAAAATGCACTCAAAACAGTGGATGAACATGCTAAAGAGAAAAGTGAACTTGATGCTATCAGCAATGATGTCCTTTTTGGTGAATCAGCAAGAGAAGAGCTTTACATGTTTTATGAGGCCAACAAGTCTTCAAATGGATCCATGTTACCATTGAGTAGTTTGAAGTCATTTTCTCCTCATACTTCTTTTCTGAAACGCAATAAATTATCCTCAACAATTGGGAATACCATTCTAAAAGGATCTGAATTGTCAACAGAGAAGAGTGCAGAATATGTTGAAGGAATTGCACCAATTGCTAGTTACAAAGAAGACCATCCCCCAGTCAATAGAAGTAAATACTTGGACAAAGGCGGCAGAGCTCTGGGAGATGGGGAAAGAAATCACCCAGTTCagaaatatgacaaaattttacCCCAGATTGAGCAGTCAACAAGAGCACATGTTGATCAGAAAAATTATCGTTCACAACATGTCAACACATATAATCGTTTGCTAAAAGATGGGAGGTTACATGAATGCGTAGAGTTGCTTAAAGATATGGAAATAAAGGGTGTTTTAGATATGAGCAAGGTTCATCATGCAAAGTTTTTTAACATCTGCAAGAGACAAAAAGCTGTTAGAGAAGCTTTTGATTACACTAAGCTTATTCCAAATCCAAAGTTGAGTACCTTTAATATGCTCATGACAGTGTGTGCAAGCTCTCAAGATTCAGAAgGGGCATTCCAAGTTCTGCATCTTGTTCAGGGGGCTGGACTGAAACCTGATTGTAAACTTTATACCACACTGATATCAACTTGTGCTAAGAGTGGGAAAGTTGATCGAATGTTTGAAGTGTATCATGAGATGGTTAATTCTGGAGTTGAACCTAATGTTCATACCTATGGTGCACTTATTGATGGTTGTGCTAGAGCTGGGCAAGTTGCTAAAGCTTTTGGCGCTTATGGGATAATGAGGTCTAAGAAAGTTCAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCGTGTGCTCAGTCAGGAGCAGTGGATCGTGCTTTTGATGTGTTAGCAGAAATGGCAGCTGAAACACATCCTATTGACCCTGATAACATTACTCTTGGTGCATTGATGAAGGCATGCGCAAAGGCTGGTCAGGTTGAACGAGCCCGAGATGTGTATAAGatgttacaaaaatataatattaagggTACTCCAGAGGTCTACACGATTGCTATTAATTCTTGCAGTCAAACTGGAGACTGGGAATTTGCATGCAGTGTATACCGTGACATGACCGGGAAAGGGGTTCTCCCTGATGAGATGTTTCTTAGTGCACTAATAGATGTTGCGGGACATGCTAGAAAGCTGGATTCAGCCTTTGAAGTCCTACAAGAAGCCCGTGACCAAGGAATACGTATTGGAATAATGTCATATAGTTCATTGATGGGAGCCTGTAGCAATGCTAGAAACTGGCAGAAAGCATTGGAGCTATACGAGGATCTTAAGTCTCTTCAATTGGTGCAAACAGTCTCAGTAGTGAATGCTCTGATAACTGCACTGTGTGAAGGAGATCAATTTCAGAAGGCTATGGAGGTTTTATCTGAAATGAAAGAATTGGGTTTGTGTCCGAATGGTATCACATACTCAATACTCATAGTGGCAAGTGAGAAAAAGGATGACCTGGAAGCAGGTCAAATGCTCCTTTCTCAAGCCAAAAAGGATGGTGTTGTCCCTAATCTCACCATGTGTAGATGCATAATTGGCATGTGCTTGCGGAGATTTGAGAGGGCTTCCTTTGTTGGTGAAcctgttttatcttttaactCAGGCCGGCCACAAGTTGATAATAAATGGACTTCACTAGCCTTAATGGTGTATCGAGAAACAATTAGAGCTGGTGAAAGGCCTACAAGTGAGATTTTGTCACAAGTTCTGGGATGCCTTCAACTCCCTCATGACACATCTTTGAAAAGTAGACTTATTGAGAACCTGGGAGTGAGTGTTGACACTTCAAGAAGCTCAAACCTCTATTCATTAATAGATGGATTTGGTGCATATGATTCCCGCGCTTTGTCACTACTTGAGGAAGCTGCTTCAATTGGAATTGTCCCATCTGTATCATTTAAAGTGAATCCTATTGTTTTGGACATAAAAGAAATGCCTGCTTTTACTGCTGAGGTATACCTCTTAACTGTTTTCAAAGGTCTCAAGCATCGACTTGCAGCAGGCGCAAGGTTACCcaatataatcattttattgcCTGTAGAGACAGCAAAAATTTCATCTCCTGAGAAGGAGAAGGTTATTAACCTTGCAGGAAGAGCTGGCCAAGCAGTTGCAACATTGTTGAGAAGGCTTAGAATACCTTATCAGGGTAATGAATCAAATGGAAAGATCAGAATCAATGGAGTAGTTTTGAAAAGGTGGTTTCAGCCAAAGCTTGCATCTCCTTTCAGTGGAAAACCAGATTATCTGGGTTCATCTCAGTCACGACTGGGCAAAGGTATCAACCGTCAGCAGCAGAACATTCGAACTGACAATCTGTCTCTCTTTTA 3518 0.3948 MEVSLSANHQGLRSTSCSSLSFSSFSLCNLHSIRIRFLGCSHNLRPPVALRSRKKCSKLGLLRVHSPRFIFKASLDSQSIIVIVIIFTLSAVSLLYYRHSRRKKNTKEVSEIPGRPKFALSQGSNVGNQAIQTNILGFQRFQIENSLEEIGLLKESTGELNHAFEDKEAQMLFWRSTVVHEEAVMTKTSESSSDFLVSSVNNGSSSNNSEVLEQSSESSPDFLVSSVNGSSSNNSELVHEETVMTKTSETSSDFLVSSVNNGSSSNNSEAVKQSFLPVAYQSSSLEPITSVEEITELHVGRSQDESDSNSELLIIMDESKPPAASVDVENALKTVDEHAKEKSELDAISNDVLFGESAREELYMFYEANKSSNGSMLPLSSLKSFSPHTSFLKRNKLSSTIGNTILKGSELSTEKSAEYVEGIAPIASYKEDHPPVNRSKYLDKGGRALGDGERNHPVQKYDKILPQIEQSTRAHVDQKNYRSQHVNTYNRLLKDGRLHECVELLKDMEIKGVLDMSKVHHAKFFNICKRQKAVREAFDYTKLIPNPKLSTFNMLMTVCASSQDSEGAFQVLHLVQGAGLKPDCKLYTTLISTCAKSGKVDRMFEVYHEMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETHPIDPDNITLGALMKACAKAGQVERARDVYKMLQKYNIKGTPEVYTIAINSCSQTGDWEFACSVYRDMTGKGVLPDEMFLSALIDVAGHARKLDSAFEVLQEARDQGIRIGIMSYSSLMGACSNARNWQKALELYEDLKSLQLVQTVSVVNALITALCEGDQFQKAMEVLSEMKELGLCPNGITYSILIVASEKKDDLEAGQMLLSQAKKDGVVPNLTMCRCIIGMCLRRFERASFVGEPVLSFNSGRPQVDNKWTSLALMVYRETIRAGERPTSEILSQVLGCLQLPHDTSLKSRLIENLGVSVDTSRSSNLYSLIDGFGAYDSRALSLLEEAASIGIVPSVSFKVNPIVLDIKEMPAFTAEVYLLTVFKGLKHRLAAGARLPNIIILLPVETAKISSPEKEKVINLAGRAGQAVATLLRRLRIPYQGNESNGKIRINGVVLKRWFQPKLASPFSGKPDYLGSSQSRLGKGINRQQQNIRTDNLSLF 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02290 1172 MobiDBLite consensus disorder prediction 195 237 - -
Bva14g02290 1172 Pfam Pentatricopeptide repeat domain 853 911 IPR002885 -
Bva14g02290 1172 Gene3D Tetratricopeptide repeat domain 629 795 IPR011990 GO:0005515
Bva14g02290 1172 Gene3D Tetratricopeptide repeat domain 511 628 IPR011990 GO:0005515
Bva14g02290 1172 Gene3D Tetratricopeptide repeat domain 799 921 IPR011990 GO:0005515
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 725 759 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 690 724 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 795 829 IPR002885 -
Bva14g02290 1172 Pfam PPR repeat 492 513 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 618 652 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 583 617 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 653 687 IPR002885 -
Bva14g02290 1172 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 235 1171 - -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 798 824 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 586 619 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 693 723 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 620 653 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 834 865 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 728 761 IPR002885 -
Bva14g02290 1172 TIGRFAM PPR: pentatricopeptide repeat domain 551 584 IPR002885 -
Bva14g02290 1172 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 830 864 IPR002885 -
Bva14g02290 1172 Pfam Pentacotripeptide-repeat region of PRORP 550 682 IPR033443 -
Bva14g02290 1172 Pfam Pentacotripeptide-repeat region of PRORP 697 839 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02290 Bva-Chr14 19791791 19803291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02290 496 914 Glycosyltransferase AT1G05670 24.769 7.31e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02290 - - gmx:100788743 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02290 14 19791791 19803291 Bva14g02290 14 19791791 19803291 ECH