Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02275 ATGAAGCACTccattttcttccatcatcTTCCTATGTTTCTACTTTTCCTCATTGTGTTGCCCAATTCAGCAAGAAGCCATGATTACCTGGACGCATTGTCCAAGGCAATCCTCTTCTTCGAGGGCCAGCGTTCTGGGTTTCTGCCACAGGACCAGAGGATGAATTGGAGGGCGAATTCGGGTCTCAGTGATGGGTGGACCTACAATACGGACCTCACCGGCGGGTACTACGACGCCGGCGATAATGTGAAGTTCGGGTTTCCGATGGCTTTCACCACCACAATGTTGTCCTGGAGTGTCATCGAATTCGGAGATTCCATGCCTCCCCATGAACTTCGAAACGCGCTCGTTGCGATCCGGTGGGCTACCGATTATTTACTCAAAACGGTGTCGCAGCCTAACAGGATTTTTGTTCAGGTGGGTGACCCAAGATCAGACCACAATTGTTGGGAGAGGCCAGAAGACATGGACACAGACAGAACTGTGTATGCCGTTGATGCACCAAATCCAGCCTCCGACGTCGCCGGTGAAACCGCGGCAGCTCTAGCAGCTTCATCAATGGTGTTCGGGTCATCAGACCCAGGATATGCTGAAACACTGCTACGAAATGCTATAAAAGCCTTTGAATTTGCAGATACCTATAGAGGAGCCTATAGTGACAATGCTAATGTAAAGGAAGGTGTCTGCCCATATTACTGCGATTTTGATGGCTATCAGGACGAGTTGCTATGGGCAGCGGCATGGCTGAGGAGGGCCACAAAGGGAGATAATTTCCTTGAGTATATTCAAACCAATGCTAAAACACTTGGTGCCGATGACAACATCAATGAATTTGGTTGGGACAACAAGCACGCTGGTCTTAACGTTCTTGTCTCCAAGGAAGTCTTAGAAGGGAACATGTACTCTCTTGAATCATACAAGGCCTCAGCAGAGAGCTTCTTGTGCACACTCATCCCCGAAACATCAAGTTCACACATAGAGTACACTCCTGGTGGACTCATCTACAGACCCGGAGGCAGCAACTTGCAGCATGCAACATCAATTGCTTTCCTTGAATTAGTTTATGCTAATTACTTGGCTCGCACGTCACTAACCCTCAACTGTGGGAATGTTTATGTCAGTGCCCAAACCCTTCGGCAACACGCCAAGAAGCAAGTTGATTACATTCTGGGAGATAATCCCATGGGATTATCATACATGGTTGGCTATGGCAGCAGCTATCCACAGCGAATTCATCATCGGGGCTCCTCGTTACCCTCCATTAAAGATCATCCACAGTTCATTGCCTGCAAAGAAGGTTCAATCTACTTCAACTCGACTAACCCTAATTCTAATGCTCTTGTGGGAGCCATTGTTGGTGGACCTGGAGAAGATGATGTTTATGCTGATGATCGCGCAGATTTTAGGAAATCGGAGCCAACCACTTACATTAATGCACCTTTTGTTGGGGTTCTAGCATACTTTGCTGCTAACCCTAACCTTGATTA 1487 0.4707 MKHSIFFHHLPMFLLFLIVLPNSARSHDYLDALSKAILFFEGQRSGFLPQDQRMNWRANSGLSDGWTYNTDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGDSMPPHELRNALVAIRWATDYLLKTVSQPNRIFVQVGDPRSDHNCWERPEDMDTDRTVYAVDAPNPASDVAGETAAALAASSMVFGSSDPGYAETLLRNAIKAFEFADTYRGAYSDNANVKEGVCPYYCDFDGYQDELLWAAAWLRRATKGDNFLEYIQTNAKTLGADDNINEFGWDNKHAGLNVLVSKEVLEGNMYSLESYKASAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLARTSLTLNCGNVYVSAQTLRQHAKKQVDYILGDNPMGLSYMVGYGSSYPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNSNALVGAIVGGPGEDDVYADDRADFRKSEPTTYINAPFVGVLAYFAANPNLD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02275 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Bva14g02275 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Bva14g02275 495 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Bva14g02275 495 PANTHER ENDOGLUCANASE 24 13 494 - -
Bva14g02275 495 Gene3D - 23 494 IPR012341 GO:0005975
Bva14g02275 495 PANTHER ENDO-1,4-BETA-GLUCANASE 13 494 - -
Bva14g02275 495 SUPERFAMILY Six-hairpin glycosidases 13 490 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02275 Bva-Chr14 19558196 19562411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02275 10 491 Glycoside Hydrolase AT1G70710 60.124 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02275 K01179 - gmx:100814545 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02275 14 19558196 19562411 Bva14g02275 14 19558196 19562411 ECH