Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02242 ATGCAGCTCAAAACCCTAACCCTCCCTCCCCGAATTCCCATTCGAAACCCTAATTTCCAACGATTCTCTCAACCTCCGATTCGTTTCAACTTCTCCAATCATCGACTGAGAAGCTCAACTTTTCTGCCGAGGTTTCGGATATCTTCAACGGAGGATCATTGCTGTAAATTAGTCACAGCTTGTATTCTCAATGGCGAGGGAGTTCCCGGCGGTATTCTGGAAGCATCGAGCGAGAATAGATGTAGTTCTGAGTCAGTTTTGTCTTTTGAAAATGAACAGAAGGAGGCGGAGGTTGAAAGACCCAAGAGAGAGGCATTGATGAATCAGAGTATGTGGAcgcaaataaagaaaattgtaatgttttcGGGACCTGCCACGGGGTTATGGATCTGTGCACCATTGATGAGTCTCATCTCCACGGCTGTGGTTGGTCGAGGAAGCTCAACCGAGCTTGCTGCTTTGGGACCTGGAACAGTTTTTTGCGACAATATGAATCTTTTGTTCATGTTCCTTTCAATTGCAACTTCAAACATGGTCGCTACTTCACTTGCCAAAGGGGACaaaaatgaagacaaaaatgaagtGCAGCATCAAATATCTATTTTGCTTTTTGTGGGCTTTATATGTGGGGCATTGATGCTTTTGTTTACACAAATTCTTGGTCCATGGGCACTAACTGgtTTTGCTGGGTCAAAGAATTTGCATATTGTACCCGTGGCAAGCAAATATGTCCAAATTCGTGGTTTGGCATGGCCTGCTGTTCTTTATGGACTGGTTGCTCAAAGTGCAAGTCTTGGCATGAAAGATTCTTGGGGACCTCTGAAGGCCTTGGTTGTTGCTAGTTCTGTGAATGGTGTTGGTCATATAATCCTATGCAATTTTCTCCAGTATGGTATTACAGGTGCAGCATGGGCAACATTGGTATCCCAAATTGTAGCATCTTATATGATGATTGAGGCCCTGAACAAGAAAGGATATAATGCTTTTGCCATGTCAGTGCCATCACCCTCTGAATTCTTGCAAATATTTGGGATTGCTGCACCTGTTTTTGTGACAATGTTCTCAAAGGTGGCTTTCTACTCTCTCATTACATATTTTGCCACAGCCATGGGCACTCACATAGTTGCAGCTCATCAGGTCATGATTCAAATGTACAGCATGTGTGTGGTATGGGGGGAGCCTCTCTCTCAAACTGCACAGTCATTTATGCCAGAGCTATTATATGGGTTCAACCGTAGTTTGGAAAAGGCTCGTAATTTGCTAAAGTCACTAATGATTATTGGAGCATTACTTGGACTGGTTATAGGGACTGTCGGAATGTCTGTTCCCTGGTTGTTTCCTAACATTTTCACACCCGATGTTAAGGTCATACAAGAGATGCACAACGTgttgattcttttctttattgcttTATCTGTGACACCCTGTACTCATAGCCTTGAGGGTACATTACTGGCGAGTAGGGATCTTACGTTTATTAGTTTATCAATGAGCGGATGCTTCTGTCTCGGAGCTCTCCTATTATTGCTTGTGAGTAGCAGGGGATATGGTTTACCTGGCTGCTGGTGTGCTCTTGTTGGATTTCAATGGGCTCGGTTTTTTCTCGCTCTCTGGCGTCTACTTTCTCCTAATAGCATGCTTTACTCTGAAGAAAGGCTAGTAGTATA 1667 0.4229 MQLKTLTLPPRIPIRNPNFQRFSQPPIRFNFSNHRLRSSTFLPRFRISSTEDHCCKLVTACILNGEGVPGGILEASSENRCSSESVLSFENEQKEAEVERPKREALMNQSMWTQIKKIVMFSGPATGLWICAPLMSLISTAVVGRGSSTELAALGPGTVFCDNMNLLFMFLSIATSNMVATSLAKGDKNEDKNEVQHQISILLFVGFICGALMLLFTQILGPWALTGFAGSKNLHIVPVASKYVQIRGLAWPAVLYGLVAQSASLGMKDSWGPLKALVVASSVNGVGHIILCNFLQYGITGAAWATLVSQIVASYMMIEALNKKGYNAFAMSVPSPSEFLQIFGIAAPVFVTMFSKVAFYSLITYFATAMGTHIVAAHQVMIQMYSMCVVWGEPLSQTAQSFMPELLYGFNRSLEKARNLLKSLMIIGALLGLVIGTVGMSVPWLFPNIFTPDVKVIQEMHNVLILFFIALSVTPCTHSLEGTLLASRDLTFISLSMSGCFCLGALLLLLVSSRGYGLPGCWCALVGFQWARFFLALWRLLSPNSMLYSEERLVV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02242 555 PANTHER PROTEIN DETOXIFICATION 27 549 - -
Bva14g02242 555 CDD MATE_DinF_like 116 542 IPR044644 -
Bva14g02242 555 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 27 549 IPR044644 -
Bva14g02242 555 Pfam MatE 130 284 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva14g02242 555 TIGRFAM matE: MATE efflux family protein 124 522 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02242 Bva-Chr14 19087943 19093158 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02242 K03327 - qsu:112011823 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02242 14 19087943 19093158 Bva14g02242 14 19087943 19093158 ECH