Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01153 ATGTCGATAACCCAGAACCTGACTACTTCaatctcttcttcctcttcctctttcttaGCCCCCTCTAGCTTCAACTCTAGGAGACAGAATGTTTCACTGCCAGCCAAAAGGGTGGGCGTTTGTAAATGCGTTGCGACTCCTCAAGAACAAGAAGTGCAAACAGccTACAAGACAAAGGTCTCCCGCAATGCAAACATTGCTAAACTTCAAGCTGGTTATCTCTTTCCGGAGATTGCTAGAAGAAGGTCTGCCCACTTGCTTAAGTATCCTGATGCTAAAGTGATAAGCCTTGGAATTGGTGATACTACTGAACCCATTCCTGAAGTCATAACTTCTGCAATGGCAAAGAAAGCACATGCTTTATCCACCATTGAAGGTTATAGTGGTTATGGAGCCGAACAAGGTGAAAAGCCACTGAGAAGTGCCATTGCTTCAACATTTTACAGCCACCTTGACATAGAGGtagatgatatttttgtttcagatGGAGCAAAGTGTGACATATCTCGCCTTCAGATGGTCTTTGGGTCAAATGTAAAAATGGCAGTGCAAGATCCATCATACCCGGCCTATGTAGACTCAAGTGTTATTATGGGTCAGACTGGCCCGTACCAGAAGGATGTTGAGAAGTATGGAAACATTGAATACATGAGGTGTAATCCTGAAAACGGTTTCTTCCCTGATTTGTCTGCTATTTCTCGACCTGATGTCATATTTTTCTGCTCGCCAAACAATCCAACTGGTGCTGCAGCAACAAGGGAGCAACTGATACAATTAGTGCAGTATGCCCAGGACAATGGGTCTATAATAGTCTATGATTCTGCATACGCAATGTATATTTCGGGCGACAACCCACGCTCCATCTATGAAATTCCTGGTGCCAAAGAGGTCGCCATTGAAACATCATCCTTTAGTAAGTATGCTGGGTTCACTGGTGTTCGACTGGGATGGACCGTGGTTCCAAAGCAGCTGCTATATTCAGATGGATTTCCTGTTGCTAAGGACTTTAACCGTATTGTGTGTACTAGTTTCAATGGTTCATCCAATATTTCTCAGGCTGGTGGTCTGGCTTGCCTTTCACCAGAAGGCCTTCAGGCTATGCAAGAGGTTATTGGATTCTACAAAGAAAACACCAATATAATAGTAGATACCTTTGAGTCTCTTGGTTTTAAAGTATATGGAGGCAAAAATGCACCATATGTGTGGGTTCATTTCCCTGGCCGAAGCTCATGGGATGTATTCAGTGAGATTCTTGAGAAGACTCACGTGGTTACAACTCCTGGTAGTGGTTTTGGACCTGGTGGGGAAGGTTTCGTCAGGGTAAGTGCCTTCGGTCACagggaaaatattttggagGCTTGCAGAAGATTCAAGCAGCTATATAAGTG 1388 0.4222 MSITQNLTTSISSSSSSFLAPSSFNSRRQNVSLPAKRVGVCKCVATPQEQEVQTAYKTKVSRNANIAKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITSAMAKKAHALSTIEGYSGYGAEQGEKPLRSAIASTFYSHLDIEVDDIFVSDGAKCDISRLQMVFGSNVKMAVQDPSYPAYVDSSVIMGQTGPYQKDVEKYGNIEYMRCNPENGFFPDLSAISRPDVIFFCSPNNPTGAAATREQLIQLVQYAQDNGSIIVYDSAYAMYISGDNPRSIYEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKQLLYSDGFPVAKDFNRIVCTSFNGSSNISQAGGLACLSPEGLQAMQEVIGFYKENTNIIVDTFESLGFKVYGGKNAPYVWVHFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01153 462 CDD AAT_like 95 459 - -
Bva14g01153 462 SUPERFAMILY PLP-dependent transferases 73 457 IPR015424 -
Bva14g01153 462 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 61 459 IPR019942 GO:0008483
Bva14g01153 462 Gene3D Aspartate Aminotransferase, domain 1 74 458 IPR015422 GO:0003824
Bva14g01153 462 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 8 462 - -
Bva14g01153 462 Gene3D - 104 361 IPR015421 GO:0003824
Bva14g01153 462 PANTHER AMINOTRANSFERASE 8 462 IPR019942 GO:0008483
Bva14g01153 462 MobiDBLite consensus disorder prediction 1 23 - -
Bva14g01153 462 Pfam Aminotransferase class I and II 93 457 IPR004839 GO:0009058|GO:0030170
Bva14g01153 462 Hamap LL-diaminopimelate aminotransferase [dapL]. 61 460 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01153 Bva-Chr14 5611786 5617463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01153 K10206 - gmx:100801405 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01153 14 5611786 5617463 Bva14g01153 14 5611786 5617463 ECH