Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01143 ATGGCTTCTTCGGAGATCGAGGTGGTATCATCGGACTCAAAAGCCCAGAACATTCCCAATGAACCTCCTATAGTCGATGTGTTCTCTGCCTGTGTTTATGGGGACCTTGAGAAATTGAGAAAGTTTGTGGAAGAAGATGGTGCTTCCGTTTCTATACCTGATGTTAATGGCTATTATGCTCTTCAATGGGCATCTCTTAACTACTTTCCAGAAATCATGCTGTATATAATTGAGCATGGAGGTGATGTCAATGCAACTGACCACATGCAACAGACAGCATTACACTGGGCAGCAGTTCGTGGTGCTACTGCAGTGGCTGATATGCTCTTGGAGAATGGTGCCCGGGTTGAGGCTGCTGATATAAATGGATACAGGGCAGTTCATGTGGCTGCTCAATATGGGCAGACAGGTTTCTTAAATCACATTATTGTAAAGTACCATGCTGATTATGATGTGCCTGATAATGAGGGAAGGAGTGCGCTTCATTGGGCTGCATATAAGGGATTTCCTGATACGATTAGATTGCTTCTATTTAGAGATGCATTTCAAGggagaaaagataaagatgGTTGTACGCCATTGCACTGGGCTGCAAAACGAGGACATGCAGAGGCATGCGCTGTGCTTGTGCATGTGGGCACAAAGGAGGAACTCATGGTGAAAGACAAAGCCGGATTCACTCCTGTGCAGCTTGCATATGAACAAGGTCATCGGCATGTCGCTCTTTTCCTTTCTAATCAACAACGAGCTCATTACAATCACTGGCGAGACAAACTTTTTTGTGGAATGATGAGGGATAGTGGCTATGCACCCATCTTATTATGTATTATAATCTTTCTCATGATCCTTTTCATCAACTCGGTTATTGTAGCTCCAAATCTTAAAAAGATTACTGCTACCGTTGGACTTTGGGCATGGGGAGTTCTTTCTCTTGTAGTTTGTGCTTTAATTATGTTCTATAGGTGTAGCAGTAAAGATCCAGGTTATGTTAAACGACCAGGAGACTTGGGTGATCATAGTGATACAGAGGATCctttattgaatattgatCTCAATTGCTCCTCTGTTTGGACGGGGAATTGGTCTCAACTCTGTCCTTCCTGCAAGATAATTAGACCTGTCCGATCTAAGCATTGCCCTACTTGTAAGCGTTGTGTGGAACAGTTTGACCACCATTGCCCATGGATATCTAACTGCGTGGGGAAGAGGAACAAAAgggatttctttatttttatctgtttGGGAAGTTTGACTTCATTCCTCAGTGGTGCCATTACTGTTCAAAGGATTTGGACATCAACACTATTATTGGCAGCAGGTGAAACATGGTTCCATCATGTGTTAGTACAACATCCAGGTGTTGTTGCGTTTTTGGCGATGGACACTGTTATTTTGATTGCTGCTACCACTTTGACAATAACACAGACTTCCATGATAGCTCGAAATATCACCACAAATGAATTAGCAAATGCTTCCCGTTACGATTATCTTCGCGGTCCTGATGGGCGGTTCAGAAACCCATATAACCATGGTTGTTGGAAGAATTGTGTTGATTTCCTTTTCCAGGGCTACACTGACGATAATGACATTGCTTGGCCTCCGTTACAGCAGGTGGCGACTTA 1622 0.4223 MASSEIEVVSSDSKAQNIPNEPPIVDVFSACVYGDLEKLRKFVEEDGASVSIPDVNGYYALQWASLNYFPEIMLYIIEHGGDVNATDHMQQTALHWAAVRGATAVADMLLENGARVEAADINGYRAVHVAAQYGQTGFLNHIIVKYHADYDVPDNEGRSALHWAAYKGFPDTIRLLLFRDAFQGRKDKDGCTPLHWAAKRGHAEACAVLVHVGTKEELMVKDKAGFTPVQLAYEQGHRHVALFLSNQQRAHYNHWRDKLFCGMMRDSGYAPILLCIIIFLMILFINSVIVAPNLKKITATVGLWAWGVLSLVVCALIMFYRCSSKDPGYVKRPGDLGDHSDTEDPLLNIDLNCSSVWTGNWSQLCPSCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGSLTSFLSGAITVQRIWTSTLLLAAGETWFHHVLVQHPGVVAFLAMDTVILIAATTLTITQTSMIARNITTNELANASRYDYLRGPDGRFRNPYNHGCWKNCVDFLFQGYTDDNDIAWPPLQQVAT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01143 540 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Bva14g01143 540 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 530 - -
Bva14g01143 540 PANTHER - 3 530 - -
Bva14g01143 540 SMART ANK_2a 89 118 IPR002110 GO:0005515
Bva14g01143 540 SMART ANK_2a 122 152 IPR002110 GO:0005515
Bva14g01143 540 SMART ANK_2a 189 218 IPR002110 GO:0005515
Bva14g01143 540 SMART ANK_2a 56 85 IPR002110 GO:0005515
Bva14g01143 540 SMART ANK_2a 224 253 IPR002110 GO:0005515
Bva14g01143 540 SMART ANK_2a 156 185 IPR002110 GO:0005515
Bva14g01143 540 ProSiteProfiles DHHC domain profile. 363 413 - -
Bva14g01143 540 Pfam Ankyrin repeats (3 copies) 120 181 IPR002110 GO:0005515
Bva14g01143 540 Pfam Ankyrin repeats (3 copies) 187 253 IPR002110 GO:0005515
Bva14g01143 540 Pfam Ankyrin repeats (3 copies) 30 119 IPR002110 GO:0005515
Bva14g01143 540 Gene3D - 24 142 IPR036770 -
Bva14g01143 540 Gene3D - 143 250 IPR036770 -
Bva14g01143 540 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Bva14g01143 540 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Bva14g01143 540 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Bva14g01143 540 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Bva14g01143 540 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Bva14g01143 540 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
Bva14g01143 540 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Bva14g01143 540 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Bva14g01143 540 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01143 Bva-Chr14 5555731 5570970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01143 56 204 Miscellaneous Gene Families AT5G02620 31.579 1.03e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01143 K20032 - gmx:100798740 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01143 14 5555731 5570970 Bva14g01143 14 5555731 5570970 ECH