Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01116 ATGAAGATTGAGATGGCTACAGGTTCAAGGTCTGCTTCCATCCAAGCAATTGAGAATGATTCCAATTCAGATACTAAGAATTTGATCTCCTATTGGATACTTCTCTCATTGATATACCTTTTCGAGTATGCTTTTATGAAGCTTCTTGAATGGTTCCTGTTATGGCCTTacttcaagttgaccatgaTATGCTGGCTGGTCATGCCAAACTTCAGaagatcttttcttgtttacaGAGACTTTATTCATCCATGCATCTCTATAAATCCCCAAAGGGTCATAAGCAGAATAGAGAACTGGAAGAAGTTCTTTGTCAAGAAAGATAACTTTTTACTGCAGGCAGAGAAGTACATAAAAGAGAATGGAACTGAAGCTTTGGAGAAACTCATTTCTAGCAAGAACATGACGCTAAATCTTGACAAGGAAATAACAGCAGTACCAGCTacaggaaagaaagaaaagcaacaGAAGATGGCCCGTAGTATTGAGGAAGAAGCTAAAAGCAATTCCTGCTACAGAGAAGATTCAGAAGAAACCAATGGAACAGTTGATCTAGCTGATTTTATGCAGACAAGTGGAAAAAGTCTCCACATTGAGCAGAGACACATCAAAGTGattgagaaaaaggaaattcctGCAGACATGAATaCTTATCCCGTGGCACCAAACCTTGCACTAAATGAGAGCCAATCATCTGGTGAGGTAGATGCTAACAGAAATGCTGGGAAAAACCACGTTGAGCAGAGATACATCAAGgcTAATCTCGTTGGACCTAACCTTGCACTGAATGAGAGCAAATCATCTGGTGCGGTAGATGCTAACAGAATGGGTGGGAAAGATGTAGAAGGTGGAGAACTCCCTCATGGTGCTGCTTCTAAGAAAATGCAGAAAGAATGGACTTGTCCTATATGTCAGGTGACAACTACAAGTGAAGAAACCTTGAATATCCACGTGCATGGGAGGAAACATGTAGCTGCACTTGAAGCACTGAGATGGAAACCAAAGATTCAGCATGTAAACAAAGAGCAAAAAAATCCTCAAATTCCCATTGCAACTCAGCCAGGCAGCGAGCCTGAAAAGATTATTCTCACTGATGCTGTAAACCAAATAAGAGTTACAGGTCAGCAGAATAAAGGCAAAGCTGACCAAAGTATTGTTCAGCCACCTGCTAATACAACTGACCAGCTAAATGCCAAGAATGTAAATGGGGAATTCACCAATGGTTTGAAAGGGTTTATAATGGTAGATCACAAGAACACGCAGTGGCAGCAAAAGAACATGGGAAAACCTGTTGGAATTGATGATAGTGGTTTGAGATGCAAGCTCTGTAATGTAGTTTGCACTCGCGAGGGAGACATGGCTTCTCACTTAAACGGGAGGAAGCACTTGGCTCGAGTTGAATCTTCATCTGGGTCATCGGTGGTACAAGATTTATGAAGTCGACTCTCTGCAAAACTGTGCCTCAAGAACAGCAAAAAGAGCTTCAATTTCAAGATGGGTTATCTCTGGTTTCTCAAACTGTGCCTCAAATGCATCGATTTGCTTGCATGGCCTCTCCTTGCTTTGGGGTATCCTCTGTGTGCTTCCATCCAAGCAATTGAGAATGATTCCAATTCAGATACTAAGAATTTGATCTCTTATTGGATACTTCTCTCACTGATATACCTCTTCGAGTATGCCTTTCTGGAGCTTCTTGAATGGTTCCTGTTATGGCCTTACTTCAAGTTGACAATAATATTCTGGCTGGTCATACCAGACTTCAGAAGATCGTTTCTTGTTTACAGACAACTTTTTCATCCATGTATCTCTATGAATCCACAAAGGGTCACAAGCAGAAGCGAGAAATGGAAGGAGTCATTTTTCAAGAAAGAGAACTTTTTACTGCAGGTAGAGGAATACATCAAAGATAATGGAACTGAAGCTTTGGAAAAAGTCATTTCTAGCAAGAACATGGCACGTAGTACTGAGGAAGAAGCAGTAAAAGCAGTTCCTGCTACAGAGAAGATTCAGAAGAAACAAATGGAACAGACAAACATTGAGCAGAGTTACATTAAGGTGATTGAGAAAAAGGAAGTTCTTGCAGACAAGAACgTTAATCCCATTGCACCTAACCTTGTACTGAAGGAAAGCAAATCATCTGGTGCGGTAGATGCTAACAGAATGACTTTTAAAGACCACATTGAGCAGAGATGCATCAAGGTGGTTGAGAAAAAGGAAGTTCATGCAGACAAGAATgcTAATCCCACTGCACCTACCCTTTCTCTGAATAAGAGCAAATCATCGGGTGCGGTAGATGCTAACAGAATGGCTGGGAAAGATGTAGAAGGTGGAGAACTCCCTCTTAGTGCTGCTTCTAAGAAAATGCAGAAAGAGTGGACTTGTGCTATCTGTCAGGTGACAACTACAAGTGAAAAAACCTTGAATGAGCACTTGCATGGGAAGAAACATATGGCTGCTTGTGAAGCAGTGAAAGGGAAAGCAAAGATTCAGCAAGTaaacaaaaagcaaaagaaccCTCAAATTTCAATTGCAACTCAGCCAGGCAGCCAGCCTGAAAAGATTATTCTCACTGATGCAGTAAATGAAAATTGTCTTCATGCAGCTGCTAATAAAACTAAGCTGTTAAATGCCAAGAATGTAAACGGGAAATTCGACAATGGTTTGAAAGggtttataaatattgatcAGAAGAAGATGCAAGAACAGCAAAAGAACATGGGAAAACCTGTTGGAATTAATGATGGTGGTTTGATATGCAACCTCTGTCATGTCTTTTGCTGTAATGAGGGTGCCATGTCCTCTCACTTAAACGGGAGGAAACACTTGGCTCGAGTTGAATCTTCATCTGGATCACCGGTGATACAAAATTCATG 2873 0.3944 MKIEMATGSRSASIQAIENDSNSDTKNLISYWILLSLIYLFEYAFMKLLEWFLLWPYFKLTMICWLVMPNFRRSFLVYRDFIHPCISINPQRVISRIENWKKFFVKKDNFLLQAEKYIKENGTEALEKLISSKNMTLNLDKEITAVPATGKKEKQQKMARSIEEEAKSNSCYREDSEETNGTVDLADFMQTSGKSLHIEQRHIKVIEKKEIPADMNTYPVAPNLALNESQSSGEVDANRNAGKNHVEQRYIKANLVGPNLALNESKSSGAVDANRMGGKDVEGGELPHGAASKKMQKEWTCPICQVTTTSEETLNIHVHGRKHVAALEALRWKPKIQHVNKEQKNPQIPIATQPGSEPEKIILTDAVNQIRVTGQQNKGKADQSIVQPPANTTDQLNAKNVNGEFTNGLKGFIMVDHKNTQWQQKNMGKPVGIDDSGLRCKLCNVVCTREGDMASHLNGRKHLARVESSSGSSVVQDLSRLSAKLCLKNSKKSFNFKMGYLWFLKLCLKCIDLLAWPLLALGYPLCASIQAIENDSNSDTKNLISYWILLSLIYLFEYAFLELLEWFLLWPYFKLTIIFWLVIPDFRRSFLVYRQLFHPCISMNPQRVTSRSEKWKESFFKKENFLLQVEEYIKDNGTEALEKVISSKNMARSTEEEAVKAVPATEKIQKKQMEQTNIEQSYIKVIEKKEVLADKNVNPIAPNLVLKESKSSGAVDANRMTFKDHIEQRCIKVVEKKEVHADKNANPTAPTLSLNKSKSSGAVDANRMAGKDVEGGELPLSAASKKMQKEWTCAICQVTTTSEKTLNEHLHGKKHMAACEAVKGKAKIQQVNKKQKNPQISIATQPGSQPEKIILTDAVNENCLHAAANKTKLLNAKNVNGKFDNGLKGFINIDQKKMQEQQKNMGKPVGINDGGLICNLCHVFCCNEGAMSSHLNGRKHLARVESSSGSPVIQNS 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01116 956 SMART ZnF_U1_5 435 469 IPR003604 GO:0003676|GO:0008270
Bva14g01116 956 SMART ZnF_U1_5 788 822 IPR003604 GO:0003676|GO:0008270
Bva14g01116 956 SMART ZnF_U1_5 296 330 IPR003604 GO:0003676|GO:0008270
Bva14g01116 956 SMART ZnF_U1_5 913 947 IPR003604 GO:0003676|GO:0008270
Bva14g01116 956 MobiDBLite consensus disorder prediction 741 770 - -
Bva14g01116 956 PANTHER HVA22-LIKE PROTEINS 498 852 IPR004345 -
Bva14g01116 956 SUPERFAMILY beta-beta-alpha zinc fingers 290 336 IPR036236 -
Bva14g01116 956 Gene3D Classic Zinc Finger 892 947 - -
Bva14g01116 956 Gene3D Classic Zinc Finger 415 469 - -
Bva14g01116 956 Gene3D Classic Zinc Finger 774 821 - -
Bva14g01116 956 Gene3D Classic Zinc Finger 285 329 - -
Bva14g01116 956 SUPERFAMILY beta-beta-alpha zinc fingers 783 825 IPR036236 -
Bva14g01116 956 MobiDBLite consensus disorder prediction 746 762 - -
Bva14g01116 956 Pfam Zinc-finger of C2H2 type 791 815 - -
Bva14g01116 956 Pfam Zinc-finger of C2H2 type 439 462 - -
Bva14g01116 956 Pfam Zinc-finger of C2H2 type 917 940 - -
Bva14g01116 956 Pfam Zinc-finger of C2H2 type 299 323 - -
Bva14g01116 956 PANTHER HVA22-LIKE PROTEINS 12 344 IPR004345 -
Bva14g01116 956 Pfam TB2/DP1, HVA22 family 524 600 IPR004345 -
Bva14g01116 956 Pfam TB2/DP1, HVA22 family 12 85 IPR004345 -
Bva14g01116 956 SUPERFAMILY beta-beta-alpha zinc fingers 903 946 IPR036236 -
Bva14g01116 956 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 12 344 - -
Bva14g01116 956 SMART c2h2final6 916 940 IPR013087 -
Bva14g01116 956 SMART c2h2final6 791 815 IPR013087 -
Bva14g01116 956 SMART c2h2final6 299 323 IPR013087 -
Bva14g01116 956 SMART c2h2final6 438 462 IPR013087 -
Bva14g01116 956 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 498 852 - -
Bva14g01116 956 SUPERFAMILY beta-beta-alpha zinc fingers 427 468 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01116 Bva-Chr14 5344012 5352435 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01116 - - lang:109333068 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01116 14 5344012 5352435 Bva14g01116 14 5344012 5352435 ECH