Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00518 atgaacaaacttTGCAGACTTATCCTCTTCATTGGCTTCCTTTCATGGGCTTTGTTTCAAATATCAGTTGCTTCTGTTGTTTCAACTGGGGACTTCAATAAAGACTTCTTTGTGATATGGTCGCCTACCCATGTAAACACATCAGATGATGGACACACAAGAAGCTTGAAGCTGGATCAAGACTCTGGGTCTGGTTTTGCTTCAAACGACATGTTTTTGTTTGGGAAAATTGACATGCAAATGAAACTAGTACCAGGGCATTCTGCAGGCACTGTCTTGGCCTATTATCTGTCCTCTGATCAACCTAACCGCGATGAGATAGATTTGGAGTTTCTTGGCAACGTCACTGGCCAGCCATACATTCtccaaacaaatatttatgctGATGGATTTGACAACAGAGAGGAAAGAATTTATCTGTGGTTTGATCCAACACAAGACTTTCACACTTATTCTGTATTGTGGAACCTGCACCAGATTGTATTCATGGTGGATTCCATCCCTATAAGAGTGTACAGAAACCATGCAGACAAAGGAGTGGCATTCCCCAGATGGCAGCCAATGAGTTTGAAAGCGACCTTGTGGAATGGTGATAGCTGGGCAACGAGAGGGGGCCTTGATAAAATTGATTGGACAAAGGGTCCCTTCATAGCTTCATTCAGAGATTACAAGATTGATGCTTGTGTGTGGAAAGGGAACCCAAGATTCTGCAGAGCAGCTAGTTCTGCCAATTGGTGGAACACATATACATTTAGCACATTAACGTCCGTACAAAATAGATGGTACAAGTGGGTTAGGAAATATCACATGATTTATGACTATTGCCAAGACAATGAGAGGTTCCAAAACCAGCTTCCAATGGAATGTTCTCTTCCCAAGTATTG 884 0.4118 MNKLCRLILFIGFLSWALFQISVASVVSTGDFNKDFFVIWSPTHVNTSDDGHTRSLKLDQDSGSGFASNDMFLFGKIDMQMKLVPGHSAGTVLAYYLSSDQPNRDEIDLEFLGNVTGQPYILQTNIYADGFDNREERIYLWFDPTQDFHTYSVLWNLHQIVFMVDSIPIRVYRNHADKGVAFPRWQPMSLKATLWNGDSWATRGGLDKIDWTKGPFIASFRDYKIDACVWKGNPRFCRAASSANWWNTYTFSTLTSVQNRWYKWVRKYHMIYDYCQDNERFQNQLPMECSLPKY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00518 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED 7 292 - -
Bva14g00518 294 Gene3D - 18 293 - -
Bva14g00518 294 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 14 220 IPR000757 GO:0004553|GO:0005975
Bva14g00518 294 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 241 289 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva14g00518 294 PIRSF EndGlu_transf 2 294 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva14g00518 294 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 292 IPR013320 -
Bva14g00518 294 Pfam Glycosyl hydrolases family 16 33 213 IPR000757 GO:0004553|GO:0005975
Bva14g00518 294 CDD GH16_XET 28 289 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva14g00518 294 ProSitePatterns Glycosyl hydrolases family 16 active sites. 106 116 IPR008263 GO:0004553|GO:0005975
Bva14g00518 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 7 292 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00518 Bva-Chr14 2496344 2497538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00518 68 294 Glycoside Hydrolase AT2G14620 74.449 6.27e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00518 K08235 - gmx:100793169 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00518 14 2496344 2497538 Bva14g00518 14 2496344 2497538 ECH