Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00472 ATGGCGTCATCTATGTTATGCCAACTCTCTGCCCCTGCCGCACCAGTTATCGATGGCTCTTTAGCTGCTGGCCGAGTGGGTGCTTCTAATTCGTCCTTCTTTCATGGAACCGAGCTCTTATCTTGTGCTCCGCGTTCTATTGCTCACAAAAAGAGAAGTCTAGCTCGAAGGTGCTTTAAGTCTCCTCTTGCCCAGTCCTTGGATCACATTCCCAAGCAGTTCAGGCGAGAAAATCTCAAAGATGGGTTGATGGATAATTACAAGAATGCACCTCAATATCTACATGGTCTTACTCCTTCACAAATGGACATGTTCATGACAGAAGATAATCCTGTCCGCCGGCAGTCTGAAAGTGTTACAGAGGAAAGCATCTCATCTGCCAAGAACTATTTGGATAATGGTGGCATGTGGAGTATGTCTGGCATGGGGGATAATGGCCCATCAAAGTACAGCATGAGTGTTAGTATGTATCGAGGAGGAGCAAGGGGTTATGGAAGATCTAGAACTCCTCCACCGGATTTACCTTCTTTGCTCTTAGATGCTCGAATAATCTATCTGGGCATGCCAATTGTACCGGCTGTAACAGAACTTCTTGTGGCTCAGTTTATGTGGTTAGATTATGACGACCCTTCCAAAcccatatatttatatattaattcaccAGGGACTCAGGACGAGAAGATGGAGACTGTAGGATCAGAAACTGATGCGTATGCTATAGCTGATATGATAAATTATGTCAAAGCAGATGTCTATACCGTGAATGTTGGCATGGCGTTTGGTCAAGCAGCAATGTTTCTTTCCCTTGGAGCAAAGGGTTATCGTGCTTTGCAGCCAAATTCATCTACCAAATTGTATCTCCCCAAAGTCAGCAGATCAAGTGGTGCTGTTATAGACATGTGGATTAAGGCTAAGGAGCTAGACGCAAACACTGACTACTACATTGAGCTGTTGGCAAGAGGAATTGGGaaatcaaaggaagaaattgctAAGGACATACAGCGGCCTAAATATTTTCAAGCACAAGAAGCCATAGACTATGGCATTGCTGACAAAATCATTGAATCAAGGGATGTTGCATTTGAGAAGCGGAATTATGATGAATTGCTTGCTCAATCAAGAGCAATGAGGAGAAAAGCTGGTGGTGGCCCTCCGCAAGCAGCTCCTTCTGGATTTAGGTA 1181 0.4318 MASSMLCQLSAPAAPVIDGSLAAGRVGASNSSFFHGTELLSCAPRSIAHKKRSLARRCFKSPLAQSLDHIPKQFRRENLKDGLMDNYKNAPQYLHGLTPSQMDMFMTEDNPVRRQSESVTEESISSAKNYLDNGGMWSMSGMGDNGPSKYSMSVSMYRGGARGYGRSRTPPPDLPSLLLDARIIYLGMPIVPAVTELLVAQFMWLDYDDPSKPIYLYINSPGTQDEKMETVGSETDAYAIADMINYVKADVYTVNVGMAFGQAAMFLSLGAKGYRALQPNSSTKLYLPKVSRSSGAVIDMWIKAKELDANTDYYIELLARGIGKSKEEIAKDIQRPKYFQAQEAIDYGIADKIIESRDVAFEKRNYDELLAQSRAMRRKAGGGPPQAAPSGFR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00472 393 PRINTS Clp protease catalytic subunit P signature 332 351 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00472 393 PRINTS Clp protease catalytic subunit P signature 213 233 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00472 393 PRINTS Clp protease catalytic subunit P signature 173 188 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00472 393 PRINTS Clp protease catalytic subunit P signature 253 270 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00472 393 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 59 381 - -
Bva14g00472 393 SUPERFAMILY ClpP/crotonase 168 359 IPR029045 -
Bva14g00472 393 CDD S14_ClpP_2 182 353 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva14g00472 393 Pfam Clp protease 176 356 IPR023562 -
Bva14g00472 393 Gene3D - 156 362 - -
Bva14g00472 393 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 59 381 IPR023562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00472 Bva-Chr14 2269110 2272206 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00472 K01358 - jre:109008849 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00472 14 2269110 2272206 Bva14g00472 14 2269110 2272206 ECH